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* UK Health Security Agency Research and analysis NOIDS CAUSATIVE AGENTS: WEEK 24 (WEEK ENDING 19 JUNE 2022) Updated 16 January 2023 CONTENTS * NOIDs weekly report * Statutory Notifications
of causative agents, grouped by root organism * Carbapenemase-producing Enterobacterales (CPE)* * Other carbapenemase-producing Gram-negative organisms* Print this page © Crown copyright
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https://www.gov.uk/government/publications/notifiable-diseases-causative-agents-reports-for-2022/noids-causative-agents-week-24-week-ending-19-june-2022 NOIDS WEEKLY REPORT Laboratories in
England have a statutory duty to notify the UK Health Security Agency (UKHSA) of the identification of the following causative agents: * Bacillus anthracis * Bacillus cereus * Bordetella
pertussis * Borrelia spp * Brucella spp * Burkholderia mallei * Burkholderia pseudomallei * Campylobacter spp * Carbapenemase-producing Gram-negative bacteria * Chikungunya virus *
Chlamydophila psittaci * Clostridium botulinum * Clostridium perfringens * Clostridium tetani * Corynebacterium diphtheriae * Corynebacterium ulcerans * Coxiella burnetii * Crimean-Congo
haemorrhagic fever virus * Cryptosporidium spp * Dengue virus * Ebola virus * Entamoeba histolytica * Escherichia coli O 157 * Francisella tularensis * Giardia lamblia * Guanarito virus *
Haemophilus influenzae (invasive) * Hanta virus * Hepatitis A * Hepatitis B * Hepatitis C * Hepatitis D * Hepatitis E * Influenza virus * Junin virus * Kyasanur Forest disease virus * Lassa
virus * Legionella spp * Leptospira interrogans * Listeria monocytogenes * Machupo virus * Marburg virus * Measles virus * Monkeypox virus * Mumps virus * Mycobacterium tuberculosis complex
* Neisseria meningitidis * Omsk haemorrhagic fever virus * Plasmodium falciparum * Plasmodium Knowlesi * Plasmodium Malariae * Plasmodium Ovale * Plasmodium Vivax * Polio virus * Rabies
virus * Rickettsia spp * Rift Valley fever virus * Rubella virus * Sabia virus * Salmonella spp * SARS Coronavirus * Shigella spp * Streptococcus group A (invasive) * Streptococcus
pneumoniae (invasive) * Varicella zoster virus * Variola virus * Vibrio cholerae * West Nile Virus * Yellow fever virus * Yersinia pestis STATUTORY NOTIFICATIONS OF CAUSATIVE AGENTS, GROUPED
BY ROOT ORGANISM Totals for the current week compared to the previous 5. WEEK NOTIFICATION RECEIVED 2022/19 2022/20 2022/21 2022/22 2022/23 2022/24 BACILLUS Bacillus cereus 16
15 20 15 19 24 BORDETELLA Bordetella pertussis - - - - 3 2 BORRELIA Borrelia burgdorferi 13 10 16 17 23 21 Borrelia sp 1 - - 1 1 2 Borrelia tillae - - - - 1 -
BRUCELLA Brucella melitensis - - - 1 - - Brucella sp - - - - 1 1 BURKHOLDERIA Burkholderia pseudomallei - 1 - - - 1 CAMPYLOBACTER Campylobacter coli 20 34
24 24 34 48 Campylobacter fetus 2 2 1 - - - Campylobacter jejuni 270 349 391 275 352 352 Campylobacter lari - 1 - - 1 - Campylobacter other named - 1 - 1 2 - Campylobacter sp 878 1,189
1,079 865 1,211 1,336 Campylobacter upsaliensis 1 - - - - - Campylobacter ureolyticus (bacteroides corrodens) 1 1 2 - 1 - CHIKUNGUNYA VIRUS Chikungunya virus 1 - - 1 - -
CLOSTRIDIUM Clostridium perfringens 36 30 40 27 28 20 Clostridium tetani - - 1 - - - CORONAVIRUS Coronavirus 66 51 70 38 62 67 Human coronavirus hku1 1 - - - - - SARS
coronavirus - - 1 - - - SARS-CoV-2 antibody indeterminate 98 115 122 49 120 145 SARS-CoV-2 antibody void 72 36 33 27 28 121 SARS-CoV-2 coronavirus (covid- 19) 52,605 42,729 35,661 40,419
66,732 85,893 SARS-CoV-2 coronavirus (covid- 19) indeterminate 854 936 966 751 860 773 SARS-CoV-2 IgG antibody negative 566 658 581 305 623 711 SARS-CoV-2 IgG antibody positive 2,073 1,910
1,348 747 1,760 2808 SARS-CoV-2 IgM antibody negative 30 13 15 2 3 15 SARS-CoV-2 IgM antibody positive 10 2 4 - - 6 SARS-CoV-2 total antibody negative 1,189 681 519 277 614 2,779 SARS-CoV-2
total antibody positive 2,680 2,089 1,619 1,055 1,678 3,695 CORYNEBACTERIUM Corynebacterium diphtheriae 4 - 1 1 5 3 Corynebacterium ulcerans - - 1 - - - COXIELLA
Coxiella burnetii - 1 - - 1 - CRYPTOSPORIDIUM Cryptosporidium cuniculus - - 1 - - - Cryptosporidium hominis - - 3 1 4 1 Cryptosporidium meleagridis - - 1 - - - Cryptosporidium
parvum 38 57 31 20 21 10 Cryptosporidium sp 17 20 18 12 25 29 ENTAMOEBA Entamoeba histolytica 1 1 1 2 - 1 ESCHERICHIA Escherichia coli O 157 10 9 6 6 14 8
FLAVIVIRUSES Dengue virus 2 - 2 - - 1 GIARDIA Giardia lamblia 2 1 2 2 3 3 Haemophilus Haemophilus influenzae 36 53 65 54 62 46 HEPATITIS VIRUSES
Hepatitis A 15 12 9 6 13 14 Hepatitis B 244 198 236 127 177 185 Hepatitis C 316 369 377 326 309 435 Hepatitis D 6 3 2 - 6 3 Hepatitis E 30 34 34 21 36 38 INFLUENZA VIRUS
Influenza A 520 387 220 173 181 135 Influenza B 28 27 23 21 27 17 Influenza indeterminate - 1 - - - - Influenza ungrouped 3 12 35 1 10 18 LEGIONELLA Legionella other
named - - - 1 - - Legionella pneumophila 3 6 6 2 5 2 Legionella sp 3 1 2 - 4 2 LISTERIA Listeria monocytogenes 1 2 6 2 4 3 MYCOBACTERIUM Mycobacterium tuberculosis
66 68 76 56 101 65 NEISSERIA Neisseria meningitidis 6 19 14 11 14 13 ORTHOPOXVIRUS Monkeypox virus - - 1 2 390 237 PARAMYXOVIRUSES Measles virus - - - 1 6
2 Mumps virus 2 - - 2 2 1 PLASMODIUM Plasmodium falciparum - 1 1 1 - - POLYOMAVIRUS Polyomavirus BK 36 38 46 26 36 46 Polyomavirus JC 6 2 1 2 5 1 RUBELLA VIRUS
Rubella virus - 4 8 - 11 11 SALMONELLA Other salmonellas 55 56 54 41 33 27 Salmonella enteritidis 28 42 32 27 29 27 Salmonella infantis - 15 25 16 12 - Salmonella
mbandaka - - 6 - - - Salmonella newport 5 5 7 - - - Salmonella sp - 29 33 23 65 145 Salmonella typhi and paratyphi 9 22 16 17 10 - Salmonella typhimurium 26 37 39 13 12 11 SHIGELLA
Shigella boydii 4 1 - 1 - 1 Shigella dysenteriae - - - - 1 1 Shigella flexneri 12 15 15 8 11 11 Shigella sonnei 21 21 14 16 7 7 Shigella sp 35 49 38 24 42 48 STREPTOCOCCUS
Streptococcus group A 59 59 59 48 81 41 Streptococcus pneumoniae 82 69 98 91 120 70 VIBRIO Vibrio cholerae - 2 1 - - 2 CARBAPENEMASE-PRODUCING ENTEROBACTERALES
(CPE)* Please note: The numbers presented here do not include specimens that have been referred to the AMRHAI Reference Unit WEEK NOTIFICATION RECEIVED 2022/19 2022/20 2022/21 2022/22
2022/23 2022/24 CITROBACTER Citrobacter spp KPC - - - 1 1 - NDM 1 - 1 - - - OXA48 1 - - - - - ENTEROBACTER Enterobacter cloacae complex IMP - - - 1 1 - KPC
3 4 - 1 - 1 NDM 1 - - - 1 - OXA48 1 - - - - - Other enterobacter spp NDM - - - 1 - - ESCHERICHIA Escherichia coli IMP - - - 1 1 - KPC 4 4 2 2 1 - NDM 4 3 6 2 7 1
OXA48 6 3 4 - 1 1 Other - - - 1 - - KLEBSIELLA Klebsiella aerogenes OXA48 - 1 - - - - Klebsiella oxytoca KPC - 2 - 1 - - Klebsiella pneumoniae KPC 3 3 9 3 1 1 NDM 1 5 1 1 4
- OXA48 6 4 5 1 1 - Other 1 2 - 1 - - Other klebsiella spp KPC - - 1 - - - LECLERCIA Leclercia adecarboxylata KPC - - - - 1 - PROVIDENCIA Providencia
stuartii NDM - 1 - - - - OTHER CARBAPENEMASE-PRODUCING GRAM-NEGATIVE ORGANISMS* Please note: The numbers presented here do not include specimens that have been referred to the AMRHAI
Reference Unit WEEK NOTIFICATION RECEIVED 2022/19 2022/20 2022/21 2022/22 2022/23 2022/24 ACINETOBACTER Acinetobacter baumannii IMP - 1 - - - - PSEUDOMONAS
Pseudomonas aeruginosa IMP - 1 - - 1 - VIM - - 1 - - - Other 2 1 2 2 - - *for all Carbapenemase-producing Gram-negative organisms, the reports are de- duplicated by first mention of
organism species and resistance mechanism by person in a rolling 52-week period Back to top