Yidc assists the stepwise and stochastic folding of membrane proteins

Yidc assists the stepwise and stochastic folding of membrane proteins

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ABSTRACT How chaperones, insertases and translocases facilitate insertion and folding of complex cytoplasmic proteins into cellular membranes is not fully understood. Here we utilize


single-molecule force spectroscopy to observe YidC, a transmembrane chaperone and insertase, sculpting the folding trajectory of the polytopic α-helical membrane protein lactose permease


(LacY). In the absence of YidC, unfolded LacY inserts individual structural segments into the membrane; however, misfolding dominates the process so that folding cannot be completed. YidC


prevents LacY from misfolding by stabilizing the unfolded state from which LacY inserts structural segments stepwise into the membrane until folding is completed. During stepwise insertion,


YidC and the membrane together stabilize the transient folds. Remarkably, the order of insertion of structural segments is stochastic, indicating that LacY can fold along variable pathways


toward the native structure. Since YidC is essential in membrane protein biogenesis and LacY is a model for the major facilitator superfamily, our observations have general relevance. Access


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ACKNOWLEDGEMENTS We thank R.E. Dalbey (The Ohio State University) for providing plasmid pT7-7 encoding YidC with a His10 tag at the C terminus; R. Newton, J. Thoma, S. Hiller and R.E. Dalbey


for encouraging and constructive comments; and S. Weiser for assistance. This work was supported by the Eidgenössische Technische Hochschule Zürich (to D.J.M.), the Swiss National Science


Foundation (grant 205320_160199 to D.J.M.), the Swiss National Center of Competence in Research “NCCR Molecular Systems Engineering” (to D.J.M.), the European Union Marie Curie Actions


program through the ACRITAS Initial Training Network (FP7-PEOPLE-2012-ITN, project 317348 to D.J.M.), U.S. National Institutes of Health grants DK51131, DK069463 and GM073210 (to H.R.K.),


and U.S. National Science Foundation grant MCB-1129551 (to H.R.K.). AUTHOR INFORMATION AUTHORS AND AFFILIATIONS * Department of Biosystems Science and Engineering, Eidgenössische Technische


Hochschule (ETH) Zurich, Basel, Switzerland Tetiana Serdiuk, Stefania A Mari & Daniel J Müller * Department of Physiology, University of California–Los Angeles, Los Angeles, California,


USA Dhandayuthapani Balasubramaniam, Junichi Sugihara & H Ronald Kaback * Department of Microbiology, Immunology & Molecular Genetics, University of California–Los Angeles, Los


Angeles, California, USA H Ronald Kaback * Molecular Biology Institute, University of California–Los Angeles, Los Angeles, California, USA H Ronald Kaback Authors * Tetiana Serdiuk View


author publications You can also search for this author inPubMed Google Scholar * Dhandayuthapani Balasubramaniam View author publications You can also search for this author inPubMed Google


Scholar * Junichi Sugihara View author publications You can also search for this author inPubMed Google Scholar * Stefania A Mari View author publications You can also search for this


author inPubMed Google Scholar * H Ronald Kaback View author publications You can also search for this author inPubMed Google Scholar * Daniel J Müller View author publications You can also


search for this author inPubMed Google Scholar CONTRIBUTIONS T.S., D.J.M. and H.R.K. designed the experiments. J.S. and D.B. cloned, expressed, purified and reconstituted LacY and YidC. T.S.


performed the SMFS experiments. S.A.M. recorded AFM images. All authors analyzed experimental data and wrote the paper. CORRESPONDING AUTHORS Correspondence to H Ronald Kaback or Daniel J


Müller. ETHICS DECLARATIONS COMPETING INTERESTS The authors declare no competing financial interests. SUPPLEMENTARY INFORMATION SUPPLEMENTARY TEXT AND FIGURES Supplementary Results,


Supplementary Figures 1–10 and Supplementary Tables 1–4. (PDF 1501 kb) RIGHTS AND PERMISSIONS Reprints and permissions ABOUT THIS ARTICLE CITE THIS ARTICLE Serdiuk, T., Balasubramaniam, D.,


Sugihara, J. _et al._ YidC assists the stepwise and stochastic folding of membrane proteins. _Nat Chem Biol_ 12, 911–917 (2016). https://doi.org/10.1038/nchembio.2169 Download citation *


Received: 16 April 2016 * Accepted: 14 June 2016 * Published: 05 September 2016 * Issue Date: November 2016 * DOI: https://doi.org/10.1038/nchembio.2169 SHARE THIS ARTICLE Anyone you share


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