Transcriptome sequencing with the genome sequencer flx system

Transcriptome sequencing with the genome sequencer flx system

Play all audios:

Loading...

ABSTRACT Transcriptome sequencing is a term that encompasses experiments including mRNA transcript-expression analysis (full-length mRNA, expressed sequence tags (ESTs) and ditags), novel


gene discovery, gene space identification in novel genomes, assembly of full-length genes, single-nucleotide polymorphism (SNP), insertion-deletion and splice-variant discovery, as well as


analyses of allele-specific expression and chromosomal rearrangement. The combination of long, accurate reads and high throughput makes 454 Sequencing™ analysis on the Genome Sequencer FLX


ideally suited to detailed transcriptome investigation. Access through your institution Buy or subscribe This is a preview of subscription content, access via your institution RELEVANT


ARTICLES Open Access articles citing this article. * HIGH-THROUGHPUT SEQUENCING-BASED GENE PROFILING ON MULTI-STAGED FRUIT DEVELOPMENT OF DATE PALM (PHOENIX DACTYLIFERA, L.) * Yuxin Yin * ,


Xiaowei Zhang *  … Jun Yu _Plant Molecular Biology_ Open Access 21 February 2012 ACCESS OPTIONS Access through your institution Subscribe to this journal Receive 12 print issues and online


access $259.00 per year only $21.58 per issue Learn more Buy this article * Purchase on SpringerLink * Instant access to full article PDF Buy now Prices may be subject to local taxes which


are calculated during checkout ADDITIONAL ACCESS OPTIONS: * Log in * Learn about institutional subscriptions * Read our FAQs * Contact customer support REFERENCES * Sugarbaker, D.J. et al.


Transcriptome sequencing of malignant pleural mesothelioma tumors. _Proc. Natl. Acad. Sci. USA_ 105, 3521–3526 (2008). Article  CAS  Google Scholar  * Toth, A.L. et al. Wasp gene expression


supports an evolutionary link between maternal behavior and eusociality. _Science_ 318, 441–444 (2007). Article  CAS  Google Scholar  * Ng, P. et al. Multiplex sequencing of paired-end


ditags (MS-PET): a strategy for the ultra-high-throughput analysis of transcriptomes and genomes. _Nucleic Acids Res._ 34, e84 (2006). Article  Google Scholar  * Ng, P. et al. Paired-end


diTagging for transcriptome and genome analysis. _Curr. Protoc. Mol. Biol._ 21.12.1–21.12.42 (2007). * Beldade, P. et al. A wing expressed sequence tag resource for _Bicyclus anynana_


butterflies, an evo-devo model. _BMC Genomics_ 7, 130 (2006). Article  Google Scholar  Download references AUTHOR INFORMATION AUTHORS AND AFFILIATIONS * 454 Life Sciences, 20 Commercial


Street, Branford, 06405, Connecticut, USA Thomas Jarvie * Roche Diagnostics, Roche Applied Science, 9115 Hague Road, Indianapolis, 46250, Indiana, USA Timothy Harkins Authors * Thomas Jarvie


View author publications You can also search for this author inPubMed Google Scholar * Timothy Harkins View author publications You can also search for this author inPubMed Google Scholar


CORRESPONDING AUTHOR Correspondence to Thomas Jarvie. ADDITIONAL INFORMATION DISCLAIMER This article was submitted to _Nature Methods_ by a commercial organization and has not been peer


reviewed. _Nature Methods_ takes no responsibility for the accuracy or otherwise of the information provided. RIGHTS AND PERMISSIONS Reprints and permissions ABOUT THIS ARTICLE CITE THIS


ARTICLE Jarvie, T., Harkins, T. Transcriptome sequencing with the Genome Sequencer FLX system. _Nat Methods_ 5, vi–viii (2008). https://doi.org/10.1038/nmeth.f.220 Download citation * Issue


Date: September 2008 * DOI: https://doi.org/10.1038/nmeth.f.220 SHARE THIS ARTICLE Anyone you share the following link with will be able to read this content: Get shareable link Sorry, a


shareable link is not currently available for this article. Copy to clipboard Provided by the Springer Nature SharedIt content-sharing initiative