Legionella and coxiella effectors: strength in diversity and activity

Legionella and coxiella effectors: strength in diversity and activity

Play all audios:

Loading...

KEY POINTS * _Legionella pneumophila_ and _Coxiella burnetii_ are two evolutionarily related intracellular bacterial pathogens that reside in distinct compartments in host cells during


infection. Successful infection by both pathogens requires a functionally exchangeable type IV secretion system called Dot/Icm, which translocates hundreds of virulence factors, termed


effectors, into host cells. * The majority of _Legionella_ spp. and _Coxiella_ spp. effectors are unique to these pathogens, and functional redundancy exists among many of them. Functional


domains that are associated with most of these effectors are enigmatic and cannot be readily predicted by currently available bioinformatics tools. * _Legionella_ spp. and _Coxiella_ spp.


promote intracellular bacterial replication by interfering with host gene expression through effectors that impose epigenetic modifications on host chromatin by different mechanisms. * _L.


pneumophila_ extensively manipulates the early phases of the secretory branch of the host vesicle trafficking pathway by hijacking the activity of key regulatory proteins such as RAB small


GTPases via multiple effectors. * _L. pneumophila_ effectors function coordinately to alter the composition of lipids, such as phosphoinositides, on the vacuole that contains the bacterium


and other organelles to facilitate its intracellular growth. * _L. pneumophila_ co-opts the ubiquitin network of host cells by effectors that function through diverse biochemical mechanisms,


including the SidE family effectors, which catalyse ubiquitylation by an E1 enzyme and E2 enzyme-independent mechanism, which represents a paradigm shift in our understanding of this


important post-translational modification. ABSTRACT _Legionella pneumophila_ and _Coxiella burnetii_ are two evolutionarily related intracellular pathogens that use the Dot/Icm type IV


secretion system to translocate effectors into host cells. These effectors are essential for the establishment of membrane-bound compartments known as replication vacuoles, which enable the


survival and replication of bacteria inside host cells. The effectors interfere with diverse signalling pathways to co-opt host processes, such as vesicle trafficking, ubiquitylation, gene


expression and lipid metabolism, to promote pathogen survival. In this Review, we explore Dot/Icm effectors from _L. pneumophila_ and _C. burnetii_ as key virulence factors, and we examine


the biochemical and cell biological functions of these effectors and their roles in our understanding of bacterial virulence. Access through your institution Buy or subscribe This is a


preview of subscription content, access via your institution ACCESS OPTIONS Access through your institution Access Nature and 54 other Nature Portfolio journals Get Nature+, our best-value


online-access subscription $29.99 / 30 days cancel any time Learn more Subscribe to this journal Receive 12 print issues and online access $209.00 per year only $17.42 per issue Learn more


Buy this article * Purchase on SpringerLink * Instant access to full article PDF Buy now Prices may be subject to local taxes which are calculated during checkout ADDITIONAL ACCESS OPTIONS:


* Log in * Learn about institutional subscriptions * Read our FAQs * Contact customer support SIMILAR CONTENT BEING VIEWED BY OTHERS COMPARATIVE ANALYSIS OF _LEGIONELLA LYTICA_ GENOME


IDENTIFIES SPECIFIC METABOLIC TRAITS AND VIRULENCE FACTORS Article Open access 14 February 2025 THE ANTI-APOPTOTIC _COXIELLA BURNETII_ EFFECTOR PROTEIN ANKG IS A STRAIN SPECIFIC VIRULENCE


FACTOR Article Open access 21 September 2020 MECHANISM OF EFFECTOR CAPTURE AND DELIVERY BY THE TYPE IV SECRETION SYSTEM FROM _LEGIONELLA PNEUMOPHILA_ Article Open access 08 June 2020


REFERENCES * Newton, H. J., Ang, D. K., van Driel, I. R. & Hartland, E. L. Molecular pathogenesis of infections caused by _Legionella pneumophila_. _Clin. Microbiol. Rev._ 23, 274–298


(2010). Article  CAS  PubMed  PubMed Central  Google Scholar  * Correia, A. M. et al. Probable person-to-person transmission of Legionnaires' disease. _N. Engl. J. Med._ 374, 497–498


(2016). Article  PubMed  Google Scholar  * Isberg, R. R., O'Connor, T. J. & Heidtman, M. The _Legionella pneumophila_ replication vacuole: making a cosy niche inside host cells.


_Nat. Rev. Microbiol._ 7, 13–24 (2009). Article  CAS  PubMed  Google Scholar  * Swanson, M. S. & Isberg, R. R. Association of _Legionella pneumophila_ with the macrophage endoplasmic


reticulum. _Infect. Immun._ 63, 3609–3620 (1995). CAS  PubMed  PubMed Central  Google Scholar  * Tilney, L. G., Harb, O. S., Connelly, P. S., Robinson, C. G. & Roy, C. R. How the


parasitic bacterium _Legionella pneumophila_ modifies its phagosome and transforms it into rough ER: implications for conversion of plasma membrane to the ER membrane. _J. Cell Sci._ 114,


4637–4650 (2001). CAS  PubMed  Google Scholar  * Kagan, J. C. & Roy, C. R. _Legionella_ phagosomes intercept vesicular traffic from endoplasmic reticulum exit sites. _Nat. Cell Biol._ 4,


945–954 (2002). Article  CAS  PubMed  Google Scholar  * Omsland, A. et al. Host cell-free growth of the Q fever bacterium _Coxiella burnetii_. _Proc. Natl Acad. Sci. USA_ 106, 4430–4434


(2009). THIS PAPER ESTABLISHES, FOR THE FIRST TIME, A METHOD FOR AXENIC CULTURING OF _C. BURNETII_ , MAKING LATER GENETIC MANIPULATION OF THIS PATHOGEN POSSIBLE. Article  PubMed  Google


Scholar  * Moffatt, J. H., Newton, P. & Newton, H. J. _Coxiella burnetii_: turning hostility into a home. _Cell. Microbiol._ 17, 621–631 (2015). Article  CAS  PubMed  Google Scholar  *


Pan, X., Luhrmann, A., Satoh, A., Laskowski-Arce, M. A. & Roy, C. R. Ankyrin repeat proteins comprise a diverse family of bacterial type IV effectors. _Science_ 320, 1651–1654 (2008).


Article  CAS  PubMed  PubMed Central  Google Scholar  * Chen, C. et al. Large-scale identification and translocation of type IV secretion substrates by _Coxiella burnetii_. _Proc. Natl Acad.


Sci. USA_ 107, 21755–21760 (2010). IN ADDITION TO IDENTIFYING NUMEROUS EFFECTORS, THIS PAPER FIRST EXPRESSED EXOGENOUS PROTEINS IN _C. BURNETII_ AND DEMONSTRATED PROTEIN TRANSLOCATION BY


ITS DOT/ICM SYSTEM. Article  PubMed  Google Scholar  * Kubori, T. & Nagai, H. The type IVB secretion system: an enigmatic chimera. _Curr. Opin. Microbiol._ 29, 22–29 (2016). Article  CAS


  PubMed  Google Scholar  * Beare, P. A. et al. Dot/Icm type IVB secretion system requirements for _Coxiella burnetii_ growth in human macrophages. _mBio_ 2, e00175-11 (2011). Article  CAS 


PubMed  PubMed Central  Google Scholar  * van Schaik, E. J., Chen, C., Mertens, K., Weber, M. M. & Samuel, J. E. Molecular pathogenesis of the obligate intracellular bacterium _Coxiella


burnetii_. _Nat. Rev. Microbiol._ 11, 561–573 (2013). Article  CAS  PubMed  PubMed Central  Google Scholar  * Ensminger, A. W. _Legionella pneumophila_, armed to the hilt: justifying the


largest arsenal of effectors in the bacterial world. _Curr. Opin. Microbiol._ 29, 74–80 (2016). Article  CAS  PubMed  Google Scholar  * Burstein, D. et al. Genomic analysis of 38


_Legionella_ species identifies large and diverse effector repertoires. _Nat. Genet._ 48, 167–175 (2016). THIS PAPER REVEALS THE EXTREMELY DIVERSE DOT/ICM EFFECTORS IN DIFFERENT _LEGIONELLA_


SPECIES FROM DIFFERENT ENVIRONMENTAL NICHES. Article  CAS  PubMed  PubMed Central  Google Scholar  * Luo, Z. Q. & Isberg, R. R. Multiple substrates of the _Legionella pneumophila_


Dot/Icm system identified by interbacterial protein transfer. _Proc. Natl Acad. Sci. USA_ 101, 841–846 (2004). Article  CAS  PubMed  Google Scholar  * Kubori, T., Shinzawa, N., Kanuka, H.


& Nagai, H. _Legionella_ metaeffector exploits host proteasome to temporally regulate cognate effector. _PLoS Pathog._ 6, e1001216 (2010). THIS PAPER IS THE FIRST TO REVEAL THE


REGULATION OF EFFECTOR ACTIVITY BY ANOTHER EFFECTOR (META-EFFECTOR). Article  CAS  PubMed  PubMed Central  Google Scholar  * Urbanus, M. L. et al. Diverse mechanisms of metaeffector activity


in an intracellular bacterial pathogen, _Legionella pneumophila_. _Mol. Syst. Biol._ 12, 893 (2016). Article  CAS  PubMed  PubMed Central  Google Scholar  * Weber, M. M. et al.


Identification of _Coxiella burnetii_ type IV secretion substrates required for intracellular replication and _Coxiella_-containing vacuole formation. _J. Bacteriol._ 195, 3914–3924 (2013).


Article  CAS  PubMed  PubMed Central  Google Scholar  * Martinez, E. et al. _Coxiella burnetii_ effector CvpB modulates phosphoinositide metabolism for optimal vacuole development. _Proc.


Natl Acad. Sci. USA_ 113, E3260–E3269 (2016). Article  CAS  PubMed  Google Scholar  * Mizuno-Yamasaki, E., Rivera-Molina, F. & Novick, P. GTPase networks in membrane traffic. _Annu. Rev.


Biochem._ 81, 637–659 (2012). Article  CAS  PubMed  PubMed Central  Google Scholar  * Elkin, S. R., Lakoduk, A. M. & Schmid, S. L. Endocytic pathways and endosomal trafficking: a


primer. _Wien. Med. Wochenschr._ 166, 196–204 (2016). Article  PubMed  PubMed Central  Google Scholar  * Bhuin, T. & Roy, J. K. Rab proteins: the key regulators of intracellular vesicle


transport. _Exp. Cell Res._ 328, 1–19 (2014). Article  CAS  PubMed  Google Scholar  * Hardiman, C. A., McDonough, J. A., Newton, H. J. & Roy, C. R. The role of Rab GTPases in the


transport of vacuoles containing _Legionella pneumophila_ and _Coxiella burnetii_. _Biochem. Soc. Trans._ 40, 1353–1359 (2012). Article  CAS  PubMed  Google Scholar  * Brombacher, E. et al.


Rab1 guanine nucleotide exchange factor SidM is a major phosphatidylinositol 4-phosphate-binding effector protein of _Legionella pneumophila_. _J. Biol. Chem._ 284, 4846–4856 (2009). Article


  CAS  PubMed  PubMed Central  Google Scholar  * Murata, T. et al. The _Legionella pneumophila_ effector protein DrrA is a Rab1 guanine nucleotide-exchange factor. _Nat. Cell Biol._ 8,


971–977 (2006). Article  CAS  PubMed  Google Scholar  * Machner, M. P. & Isberg, R. R. Targeting of host Rab GTPase function by the intravacuolar pathogen _Legionella pneumophila_. _Dev.


Cell_ 11, 47–56 (2006). Article  CAS  PubMed  Google Scholar  * Machner, M. P. & Isberg, R. R. A bifunctional bacterial protein links GDI displacement to Rab1 activation. _Science_ 318,


974–977 (2007). Article  CAS  PubMed  Google Scholar  * Schoebel, S., Oesterlin, L. K., Blankenfeldt, W., Goody, R. S. & Itzen, A. RabGDI displacement by DrrA from _Legionella_ is a


consequence of its guanine nucleotide exchange activity. _Mol. Cell_ 36, 1060–1072 (2009). Article  CAS  PubMed  Google Scholar  * Nagai, H., Kagan, J. C., Zhu, X., Kahn, R. A. & Roy, C.


R. A bacterial guanine nucleotide exchange factor activates ARF on _Legionella_ phagosomes. _Science_ 295, 679–682 (2002). Article  CAS  PubMed  Google Scholar  * Muller, M. P. et al. The


_Legionella_ effector protein DrrA AMPylates the membrane traffic regulator Rab1b. _Science_ 329, 946–949 (2010). THIS PAPER DEMONSTRATES THE USEFULNESS OF STRUCTURAL ANALYSIS IN REVEALING


CRYPTIC BIOCHEMICAL FUNCTIONS ASSOCIATED WITH _L. PNEUMOPHILA_ EFFECTORS. Article  PubMed  Google Scholar  * Neunuebel, M. R. et al. De-AMPylation of the small GTPase Rab1 by the pathogen


_Legionella pneumophila_. _Science_ 333, 453–456 (2011). Article  CAS  PubMed  PubMed Central  Google Scholar  * Tan, Y. & Luo, Z. Q. _Legionella pneumophila_ SidD0 is a deAMPylase that


modifies Rab1. _Nature_ 475, 506–509 (2011). Article  CAS  PubMed  PubMed Central  Google Scholar  * Ingmundson, A., Delprato, A., Lambright, D. G. & Roy, C. R. _Legionella pneumophila_


proteins that regulate Rab1 membrane cycling. _Nature_ 450, 365–369 (2007). Article  CAS  PubMed  Google Scholar  * Preissler, S., Rato, C., Perera, L. A., Saudek, V. & Ron, D. FICD acts


bifunctionally to AMPylate and de-AMPylate the endoplasmic reticulum chaperone BiP. _Nat. Struct. Mol. Biol._ 24, 23–29 (2017). Article  CAS  PubMed  Google Scholar  * Arasaki, K., Toomre,


D. K. & Roy, C. R. The _Legionella pneumophila_ effector DrrA is sufficient to stimulate SNARE-dependent membrane fusion. _Cell Host Microbe_ 11, 46–57 (2012). Article  CAS  PubMed 


PubMed Central  Google Scholar  * Mukherjee, S. et al. Modulation of Rab GTPase function by a protein phosphocholine transferase. _Nature_ 477, 103–106 (2011). Article  CAS  PubMed  PubMed


Central  Google Scholar  * Tan, Y., Arnold, R. J. & Luo, Z. Q. _Legionella pneumophila_ regulates the small GTPase Rab1 activity by reversible phosphorylcholination. _Proc. Natl Acad.


Sci. USA_ 108, 21212–21217 (2011). Article  PubMed  Google Scholar  * Oesterlin, L. K., Goody, R. S. & Itzen, A. Posttranslational modifications of Rab proteins cause effective


displacement of GDP dissociation inhibitor. _Proc. Natl Acad. Sci. USA_ 109, 5621–5626 (2012). Article  PubMed  Google Scholar  * Yarbrough, M. L. et al. AMPylation of Rho GTPases by


_Vibrio_ VopS disrupts effector binding and downstream signaling. _Science_ 323, 269–272 (2009). Article  CAS  PubMed  Google Scholar  * Worby, C. A. et al. The fic domain: regulation of


cell signaling by adenylylation. _Mol. Cell_ 34, 93–103 (2009). Article  CAS  PubMed  PubMed Central  Google Scholar  * Feng, F. et al. A _Xanthomonas_ uridine 5′-monophosphate transferase


inhibits plant immune kinases. _Nature_ 485, 114–118 (2012). Article  CAS  PubMed  Google Scholar  * Castro-Roa, D. et al. The Fic protein Doc uses an inverted substrate to phosphorylate and


inactivate EF-Tu. _Nat. Chem. Biol._ 9, 811–817 (2013). Article  CAS  PubMed  Google Scholar  * Ham, H. et al. Unfolded protein response-regulated _Drosophila_ Fic (dFic) protein reversibly


AMPylates BiP chaperone during endoplasmic reticulum homeostasis. _J. Biol. Chem._ 289, 36059–36069 (2014). Article  CAS  PubMed  PubMed Central  Google Scholar  * Sanyal, A. et al. A novel


link between Fic (filamentation induced by cAMP)-mediated adenylylation/AMPylation and the unfolded protein response. _J. Biol. Chem._ 290, 8482–8499 (2015). Article  CAS  PubMed  PubMed


Central  Google Scholar  * Harms, A. et al. Adenylylation of gyrase and topo IV by FicT toxins disrupts bacterial DNA topology. _Cell Rep._ 12, 1497–1507 (2015). Article  CAS  PubMed  Google


Scholar  * Lu, C., Nakayasu, E. S., Zhang, L. Q. & Luo, Z. Q. Identification of Fic-1 as an enzyme that inhibits bacterial DNA replication by AMPylating GyrB, promoting filament


formation. _Sci. Signal._ 9, ra11 (2016). Article  CAS  PubMed  Google Scholar  * Horenkamp, F. A. et al. _Legionella pneumophila_ subversion of host vesicular transport by SidC effector


proteins. _Traffic_ 15, 488–499 (2014). Article  CAS  PubMed  PubMed Central  Google Scholar  * Hsu, F. et al. The _Legionella_ effector SidC defines a unique family of ubiquitin ligases


important for bacterial phagosomal remodeling. _Proc. Natl Acad. Sci. USA_ 111, 10538–10543 (2014). THIS PAPER DEMONSTRATES THAT A CYS-HIS-ASP CATALYTIC TRIAD KNOWN TO BE INVOLVED IN


PROTEASE ACTIVITY CAN CATALYSE THE UBIQUITIN LIGATION REACTION. Article  CAS  PubMed  Google Scholar  * Qiu, J. et al. Ubiquitination independent of E1 and E2 enzymes by bacterial effectors.


_Nature_ 533, 120–124 (2016). THIS PAPER DEMONSTRATES, FOR THE FIRST TIME, THAT UBIQUITYLATION CAN BE CATALYSED BY A SINGLE PROTEIN WITHOUT THE NEED FOR THE E1 AND E2 ENZYMES AND ATP IN A


PROCESS IN WHICH UBIQUITIN IS ACTIVATED BY ADP-RIBOSYLATION. Article  CAS  PubMed  PubMed Central  Google Scholar  * Kouranti, I., Sachse, M., Arouche, N., Goud, B. & Echard, A. Rab35


regulates an endocytic recycling pathway essential for the terminal steps of cytokinesis. _Curr. Biol._ 16, 1719–1725 (2006). Article  CAS  PubMed  Google Scholar  * Gaspar, A. H. &


Machner, M. P. VipD is a Rab5-activated phospholipase A1 that protects _Legionella pneumophila_ from endosomal fusion. _Proc. Natl Acad. Sci. USA_ 111, 4560–4565 (2014). THIS PAPER REVEALS A


MECHANISM FOR ORGANELLE-SPECIFIC ELIMINATION OF A LIPID IMPORTANT FOR PHAGOSOME MATURATION BY A BACTERIAL EFFECTOR. Article  CAS  PubMed  Google Scholar  * Toulabi, L., Wu, X., Cheng, Y.


& Mao, Y. Identification and structural characterization of a _Legionella_ phosphoinositide phosphatase. _J. Biol. Chem._ 288, 24518–24527 (2013). Article  CAS  PubMed  PubMed Central 


Google Scholar  * Finsel, I. et al. The _Legionella_ effector RidL inhibits retrograde trafficking to promote intracellular replication. _Cell Host Microbe_ 14, 38–50 (2013). Article  CAS 


PubMed  Google Scholar  * Simon, S., Wagner, M. A., Rothmeier, E., Muller-Taubenberger, A. & Hilbi, H. Icm/Dot-dependent inhibition of phagocyte migration by _Legionella_ is antagonized


by a translocated Ran GTPase activator. _Cell. Microbiol._ 16, 977–992 (2014). CAS  PubMed  Google Scholar  * Rothmeier, E. et al. Activation of Ran GTPase by a _Legionella_ effector


promotes microtubule polymerization, pathogen vacuole motility and infection. _PLoS Pathog._ 9, e1003598 (2013). Article  CAS  PubMed  PubMed Central  Google Scholar  * Xu, L. et al.


Inhibition of host vacuolar H+-ATPase activity by a _Legionella pneumophila_ effector. _PLoS Pathog._ 6, e1000822 (2010). Article  CAS  PubMed  PubMed Central  Google Scholar  * Sohn, Y. S.


et al. Lpg0393 of _Legionella pneumophila_ is a guanine-nucleotide exchange factor for Rab5, Rab21 and Rab22. _PLoS ONE_ 10, e0118683 (2015). Article  CAS  PubMed  PubMed Central  Google


Scholar  * Urwyler, S. et al. Proteome analysis of _Legionella_ vacuoles purified by magnetic immunoseparation reveals secretory and endosomal GTPases. _Traffic_ 10, 76–87 (2009). Article 


CAS  PubMed  Google Scholar  * Heidtman, M., Chen, E. J., Moy, M. Y. & Isberg, R. R. Large-scale identification of _Legionella pneumophila_ Dot/Icm substrates that modulate host cell


vesicle trafficking pathways. _Cell. Microbiol._ 11, 230–248 (2009). Article  CAS  PubMed  Google Scholar  * Franco, I. S., Shohdy, N. & Shuman, H. A. The _Legionella pneumophila_


effector VipA is an actin nucleator that alters host cell organelle trafficking. _PLoS Pathog._ 8, e1002546 (2012). Article  CAS  PubMed  PubMed Central  Google Scholar  * Michard, C. et al.


The _Legionella_ kinase LegK2 targets the ARP2/3 complex to inhibit actin nucleation on phagosomes and allow bacterial evasion of the late endocytic pathway. _mBio_ 6, e00354-15 (2015).


Article  CAS  PubMed  PubMed Central  Google Scholar  * Liu, Y. et al. A _Legionella_ effector disrupts host cytoskeletal structure by cleaving actin. _PLoS Pathog._ 13, e1006186 (2017).


Article  CAS  PubMed  PubMed Central  Google Scholar  * Guo, Z., Stephenson, R., Qiu, J., Zheng, S. & Luo, Z. Q. A _Legionella_ effector modulates host cytoskeletal structure by


inhibiting actin polymerization. _Microbes Infect._ 16, 225–236 (2014). Article  CAS  PubMed  Google Scholar  * Lanzetti, L. Actin in membrane trafficking. _Curr. Opin. Cell Biol._ 19,


453–458 (2007). Article  CAS  PubMed  Google Scholar  * Latomanski, E. A., Newton, P., Khoo, C. A. & Newton, H. J. The effector Cig57 hijacks FCHO-mediated vesicular trafficking to


facilitate intracellular replication of _Coxiella burnetii_. _PLoS Pathog._ 12, e1006101 (2016). Article  CAS  PubMed  PubMed Central  Google Scholar  * Larson, C. L., Beare, P. A., Howe, D.


& Heinzen, R. A. _Coxiella burnetii_ effector protein subverts clathrin-mediated vesicular trafficking for pathogen vacuole biogenesis. _Proc. Natl Acad. Sci. USA_ 110, E4770–E4779


(2013). Article  CAS  PubMed  Google Scholar  * Yau, R. & Rape, M. The increasing complexity of the ubiquitin code. _Nat. Cell Biol._ 18, 579–586 (2016). Article  CAS  PubMed  Google


Scholar  * Maculins, T., Fiskin, E., Bhogaraju, S. & Dikic, I. Bacteria–host relationship: ubiquitin ligases as weapons of invasion. _Cell Res._ 26, 499–510 (2016). Article  CAS  PubMed


  PubMed Central  Google Scholar  * Hubber, A., Kubori, T. & Nagai, H. Modulation of the ubiquitination machinery by _Legionella_. _Curr. Top. Microbiol. Immunol._ 376, 227–247 (2013).


PubMed  Google Scholar  * Dorer, M. S., Kirton, D., Bader, J. S. & Isberg, R. R. RNA interference analysis of _Legionella_ in _Drosophila_ cells: exploitation of early secretory


apparatus dynamics. _PLoS Pathog._ 2, e34 (2006). Article  CAS  PubMed  PubMed Central  Google Scholar  * Ensminger, A. W. & Isberg, R. R. E3 ubiquitin ligase activity and targeting of


BAT3 by multiple _Legionella pneumophila_ translocated substrates. _Infect. Immun._ 78, 3905–3919 (2010). Article  CAS  PubMed  PubMed Central  Google Scholar  * Lin, Y. H. et al. Host


cell-catalyzed _S_-palmitoylation mediates Golgi targeting of the _Legionella_ ubiquitin ligase GobX. _J. Biol. Chem._ 290, 25766–25781 (2015). Article  CAS  PubMed  PubMed Central  Google


Scholar  * Shao, F., Merritt, P. M., Bao, Z., Innes, R. W. & Dixon, J. E. A. _Yersinia_ effector and a _Pseudomonas_ avirulence protein define a family of cysteine proteases functioning


in bacterial pathogenesis. _Cell_ 109, 575–588 (2002). Article  CAS  PubMed  Google Scholar  * Price, C. T., Al-Quadan, T., Santic, M., Rosenshine, I. & Abu Kwaik, Y. Host proteasomal


degradation generates amino acids essential for intracellular bacterial growth. _Science_ 334, 1553–1557 (2011). Article  CAS  PubMed  Google Scholar  * Lomma, M. et al. The _Legionella


pneumophila_ F-box protein Lpp2082 (AnkB) modulates ubiquitination of the host protein parvin B and promotes intracellular replication. _Cell. Microbiol._ 12, 1272–1291 (2010). Article  CAS


  PubMed  Google Scholar  * Ivanov, S. S., Charron, G., Hang, H. C. & Roy, C. R. Lipidation by the host prenyltransferase machinery facilitates membrane localization of _Legionella


pneumophila_ effector proteins. _J. Biol. Chem._ 285, 34686–34698 (2010). Article  CAS  PubMed  PubMed Central  Google Scholar  * Price, C. T., Al-Quadan, T., Santic, M., Jones, S. C. &


Abu Kwaik, Y. Exploitation of conserved eukaryotic host cell farnesylation machinery by an F-box effector of _Legionella pneumophila_. _J. Exp. Med._ 207, 1713–1726 (2010). Article  CAS 


PubMed  PubMed Central  Google Scholar  * Cazalet, C. et al. Evidence in the _Legionella pneumophila_ genome for exploitation of host cell functions and high genome plasticity. _Nat. Genet._


36, 1165–1173 (2004). Article  CAS  PubMed  Google Scholar  * Bhogaraju, S. et al. Phosphoribosylation of ubiquitin promotes serine ubiquitination and impairs conventional ubiquitination.


_Cell_ 167, 1636–1649.e13 (2016). THIS PAPER REVEALS THAT ADPR-UB PRODUCED BY THE MONO-ADP-RIBOSYLTRANSFERASE (MART) DOMAIN OF SIDE FAMILY MEMBERS IS CLEAVED BY PHOSPHODISTERASE ACTIVITY


WITHIN THE SAME PROTEINS AND THE RESULTING PHOSPHORIBOSYLATED UBIQUITIN IS TRANSFERRED TO SERINE RESIDUES ON THE SUBSTRATE. Article  CAS  PubMed  Google Scholar  * Kotewicz, K. M. et al. A


single _Legionella_ effector catalyzes a multistep ubiquitination pathway to rearrange tubular endoplasmic reticulum for replication. _Cell Host Microbe_ 21, 169–181 (2017). TOGETHER WITH


REFERENCE 80, THIS PAPER REVEALS THE NEED OF PHOSPHODIESTERASE ACTIVITY FOR THE UBIQUITYLATION REACTION INDUCED BY THE SIDE FAMILY EFFECTORS; IT ALSO DEMONSTRATES THAT UBIQUITYLATION OF RTN4


BY SIDE FAMILY MEMBERS LEADS TO ITS ASSOCIATION WITH THE LCV. Article  CAS  PubMed  Google Scholar  * Sheedlo, M. J. et al. Structural basis of substrate recognition by a bacterial


deubiquitinase important for dynamics of phagosome ubiquitination. _Proc. Natl Acad. Sci. USA_ 112, 15090–15095 (2015). Article  CAS  PubMed  Google Scholar  * Sorbara, M. T. & Girardin,


S. E. Emerging themes in bacterial autophagy. _Curr. Opin. Microbiol._ 23, 163–170 (2015). Article  CAS  PubMed  Google Scholar  * Itoh, T. et al. Golgi-resident small GTPase Rab33B


interacts with Atg16L and modulates autophagosome formation. _Mol. Biol. Cell_ 19, 2916–2925 (2008). Article  CAS  PubMed  PubMed Central  Google Scholar  * Rolando, M. et al. _Legionella


pneumophila_ S1P-lyase targets host sphingolipid metabolism and restrains autophagy. _Proc. Natl Acad. Sci. USA_ 113, 1901–1906 (2016). Article  CAS  PubMed  Google Scholar  * Choy, A. et


al. The _Legionella_ effector RavZ inhibits host autophagy through irreversible Atg8 deconjugation. _Science_ 338, 1072–1076 (2012). THIS PAPER UNCOVERS A HIGHLY EFFECTIVE MECHANISM FOR A


BACTERIAL PATHOGEN TO INHIBIT AUTOPHAGY IN INFECTED CELLS. Article  CAS  PubMed  PubMed Central  Google Scholar  * Jeong, K. C., Sexton, J. A. & Vogel, J. P. Spatiotemporal regulation of


a _Legionella pneumophila_ T4SS substrate by the metaeffector SidJ. _PLoS Pathog._ 11, e1004695 (2015). Article  CAS  PubMed  PubMed Central  Google Scholar  * Qiu, J. et al. A unique


deubiquitinase that deconjugates phosphoribosyl-linked protein ubiquitination. _Cell Res._ http://dx.doi.org/10.1038/cr.2017.66 (2017). * Liu, Y. & Luo, Z. Q. The _Legionella


pneumophila_ effector SidJ is required for efficient recruitment of endoplasmic reticulum proteins to the bacterial phagosome. _Infect. Immun._ 75, 592–603 (2007). Article  CAS  PubMed 


Google Scholar  * Steinberg, B. E. & Grinstein, S. Pathogen destruction versus intracellular survival: the role of lipids as phagosomal fate determinants. _J. Clin. Invest._ 118,


2002–2011 (2008). Article  CAS  PubMed  PubMed Central  Google Scholar  * VanRheenen, S. M., Luo, Z. Q., O'Connor, T. & Isberg, R. R. Members of a _Legionella pneumophila_ family of


proteins with ExoU (phospholipase A) active sites are translocated to target cells. _Infect. Immun._ 74, 3597–3606 (2006). Article  CAS  PubMed  PubMed Central  Google Scholar  * Weber, S.


S., Ragaz, C., Reus, K., Nyfeler, Y. & Hilbi, H. _Legionella pneumophila_ exploits PI(4)P to anchor secreted effector proteins to the replicative vacuole. _PLoS Pathog._ 2, e46 (2006).


Article  CAS  PubMed  PubMed Central  Google Scholar  * Schink, K. O., Tan, K. W. & Stenmark, H. Phosphoinositides in control of membrane dynamics. _Annu. Rev. Cell Dev. Biol._ 32,


143–171 (2016). Article  CAS  PubMed  Google Scholar  * Hsu, F. et al. Structural basis for substrate recognition by a unique _Legionella_ phosphoinositide phosphatase. _Proc. Natl Acad.


Sci. USA_ 109, 13567–13572 (2012). THIS PAPER REVEALS A MECHANISM USED BY _L. PNEUMOPHILA_ TO PRODUCE PTDINS4P ON THE LCV. Article  PubMed  Google Scholar  * Weber, S. S., Ragaz, C. &


Hilbi, H. The inositol polyphosphate 5-phosphatase OCRL1 restricts intracellular growth of _Legionella_, localizes to the replicative vacuole and binds to the bacterial effector LpnE. _Cell.


Microbiol._ 11, 442–460 (2009). Article  CAS  PubMed  Google Scholar  * Dong, N. et al. Modulation of membrane phosphoinositide dynamics by the phosphatidylinositide 4-kinase activity of


the _Legionella_ LepB effector. _Nat. Microbiol._ 2, 16236 (2016). TOGETHER WITH REFERENCE 94, THIS PAPER DEMONSTRATES THE COORDINATION OF TWO EFFECTORS FOR THE PRODUCTION OF PTDINS4P ON THE


LCV. Article  CAS  PubMed  Google Scholar  * Banga, S. et al. _Legionella pneumophila_ inhibits macrophage apoptosis by targeting pro-death members of the Bcl2 protein family. _Proc. Natl


Acad. Sci. USA_ 104, 5121–5126 (2007). Article  CAS  PubMed  Google Scholar  * Hubber, A. et al. The machinery at endoplasmic reticulum–plasma membrane contact sites contributes to spatial


regulation of multiple _Legionella_ effector proteins. _PLoS Pathog._ 10, e1004222 (2014). Article  CAS  PubMed  PubMed Central  Google Scholar  * Godi, A. et al. ARF mediates recruitment of


PtdIns-4-OH kinase-β and stimulates synthesis of PtdIns(4,5)P2 on the Golgi complex. _Nat. Cell Biol._ 1, 280–287 (1999). Article  CAS  PubMed  Google Scholar  * Viner, R., Chetrit, D.,


Ehrlich, M. & Segal, G. Identification of two _Legionella pneumophila_ effectors that manipulate host phospholipids biosynthesis. _PLoS Pathog._ 8, e1002988 (2012). Article  CAS  PubMed


  PubMed Central  Google Scholar  * Fu, Y. & Rubin, C. S. Protein kinase D: coupling extracellular stimuli to the regulation of cell physiology. _EMBO Rep._ 12, 785–796 (2011). Article 


CAS  PubMed  PubMed Central  Google Scholar  * Grinstein, S. & Fairn, G. D. How nascent phagosomes mature to become phagolysosomes. _Trends Immunol._ 33, 397–405 (2012). Article  CAS 


PubMed  Google Scholar  * Zhu, W., Hammad, L. A., Hsu, F., Mao, Y. & Luo, Z. Q. Induction of caspase 3 activation by multiple _Legionella pneumophila_ Dot/Icm substrates. _Cell.


Microbiol._ 15, 1783–1795 (2013). CAS  PubMed  PubMed Central  Google Scholar  * Degtyar, E., Zusman, T., Ehrlich, M. & Segal, G. A. _Legionella_ effector acquired from protozoa is


involved in sphingolipids metabolism and is targeted to the host cell mitochondria. _Cell. Microbiol._ 11, 1219–1235 (2009). Article  CAS  PubMed  Google Scholar  * Rowland, A. A. &


Voeltz, G. K. Endoplasmic reticulum–mitochondria contacts: function of the junction. _Nat. Rev. Mol. Cell Biol._ 13, 607–625 (2012). Article  CAS  PubMed  PubMed Central  Google Scholar  *


Kinchen, J. M. et al. A pathway for phagosome maturation during engulfment of apoptotic cells. _Nat. Cell Biol._ 10, 556–566 (2008). Article  CAS  PubMed  PubMed Central  Google Scholar  *


Vieira, O. V. et al. Modulation of Rab5 and Rab7 recruitment to phagosomes by phosphatidylinositol 3-kinase. _Mol. Cell. Biol._ 23, 2501–2514 (2003). Article  CAS  PubMed  PubMed Central 


Google Scholar  * Losick, V. P. & Isberg, R. R. NF-κB translocation prevents host cell death after low-dose challenge by _Legionella pneumophila_. _J. Exp. Med._ 203, 2177–2189 (2006).


Article  CAS  PubMed  PubMed Central  Google Scholar  * Rolando, M. et al. _Legionella pneumophila_ effector RomA uniquely modifies host chromatin to repress gene expression and promote


intracellular bacterial replication. _Cell Host Microbe_ 13, 395–405 (2013). Article  CAS  PubMed  Google Scholar  * Li, T. et al. SET-domain bacterial effectors target heterochromatin


protein 1 to activate host rDNA transcription. _EMBO Rep._ 14, 733–740 (2013). Article  CAS  PubMed  PubMed Central  Google Scholar  * Rolando, M. & Buchrieser, C. _Legionella


pneumophila_ type IV effectors hijack the transcription and translation machinery of the host cell. _Trends Cell Biol._ 24, 771–778 (2014). Article  CAS  PubMed  Google Scholar  * Son, J. et


al. Crystal structure of _Legionella pneumophila_ type IV secretion system effector LegAS4. _Biochem. Biophys. Res. Commun._ 465, 817–824 (2015). Article  CAS  PubMed  Google Scholar  * Ge,


J. et al. A _Legionella_ type IV effector activates the NF-κB pathway by phosphorylating the IκB family of inhibitors. _Proc. Natl Acad. Sci. USA_ 106, 13725–13730 (2009). Article  PubMed 


Google Scholar  * Losick, V. P., Haenssler, E., Moy, M. Y. & Isberg, R. R. LnaB: a _Legionella pneumophila_ activator of NF-κB. _Cell. Microbiol._ 12, 1083–1097 (2010). Article  CAS 


PubMed  PubMed Central  Google Scholar  * Belyi, Y. et al. _Legionella pneumophila_ glucosyltransferase inhibits host elongation factor 1A. _Proc. Natl Acad. Sci. USA_ 103, 16953–16958


(2006). Article  CAS  PubMed  Google Scholar  * Belyi, Y., Tabakova, I., Stahl, M. & Aktories, K. Lgt: a family of cytotoxic glucosyltransferases produced by _Legionella pneumophila_.


_J. Bacteriol._ 190, 3026–3035 (2008). Article  CAS  PubMed  PubMed Central  Google Scholar  * Shen, X. et al. Targeting eEF1A by a _Legionella pneumophila_ effector leads to inhibition of


protein synthesis and induction of host stress response. _Cell. Microbiol._ 11, 911–926 (2009). Article  CAS  PubMed  PubMed Central  Google Scholar  * Fontana, M. F. et al. Secreted


bacterial effectors that inhibit host protein synthesis are critical for induction of the innate immune response to virulent _Legionella pneumophila_. _PLoS Pathog._ 7, e1001289 (2011). THIS


PAPER DEMONSTRATES, FOR THE FIRST TIME, THAT THE INHIBITION OF HOST PROTEIN SYNTHESIS INDUCES A ROBUST IMMUNE RESPONSE. Article  CAS  PubMed  PubMed Central  Google Scholar  * Barry, K. C.,


Fontana, M. F., Portman, J. L., Dugan, A. S. & Vance, R. E. IL-1α signaling initiates the inflammatory response to virulent _Legionella pneumophila in vivo_. _J. Immunol._ 190,


6329–6339 (2013). Article  CAS  PubMed  PubMed Central  Google Scholar  * Hempstead, A. D. & Isberg, R. R. Inhibition of host cell translation elongation by _Legionella pneumophila_


blocks the host cell unfolded protein response. _Proc. Natl Acad. Sci. USA_ 112, E6790–E6797 (2015). Article  CAS  PubMed  Google Scholar  * Asrat, S., Dugan, A. S. & Isberg, R. R. The


frustrated host response to _Legionella pneumophila_ is bypassed by MyD88-dependent translation of pro-inflammatory cytokines. _PLoS Pathog._ 10, e1004229 (2014). Article  CAS  PubMed 


PubMed Central  Google Scholar  * Copenhaver, A. M., Casson, C. N., Nguyen, H. T., Duda, M. M. & Shin, S. IL-1R signaling enables bystander cells to overcome bacterial blockade of host


protein synthesis. _Proc. Natl Acad. Sci. USA_ 112, 7557–7562 (2015). Article  CAS  PubMed  Google Scholar  * Weber, M. M. et al. Modulation of the host transcriptome by _Coxiella burnetii_


nuclear effector Cbu1314. _Microbes Infect._ 18, 336–345 (2016). Article  CAS  PubMed  Google Scholar  * Luhrmann, A., Nogueira, C. V., Carey, K. L. & Roy, C. R. Inhibition of


pathogen-induced apoptosis by a _Coxiella burnetii_ type IV effector protein. _Proc. Natl Acad. Sci. USA_ 107, 18997–19001 (2010). Article  PubMed  Google Scholar  * Klingenbeck, L., Eckart,


R. A., Berens, C. & Luhrmann, A. The _Coxiella burnetii_ type IV secretion system substrate CaeB inhibits intrinsic apoptosis at the mitochondrial level. _Cell. Microbiol._ 15, 675–687


(2013). Article  CAS  PubMed  Google Scholar  * Bisle, S. et al. The inhibition of the apoptosis pathway by the _Coxiella burnetii_ effector protein CaeA requires the EK repetition motif,


but is independent of survivin. _Virulence_ 7, 400–412 (2016). Article  CAS  PubMed  PubMed Central  Google Scholar  * Kohler, L. J. et al. Effector protein Cig2 decreases host tolerance of


infection by directing constitutive fusion of autophagosomes with the _Coxiella_-containing vacuole. _mBio_ 7, e01127-16 (2016). Article  PubMed  PubMed Central  Google Scholar  * Weber, M.


M. et al. The type IV secretion system effector protein CirA stimulates the GTPase activity of RhoA and is required for virulence in a mouse model of _Coxiella burnetii_ infection. _Infect.


Immun._ 84, 2524–2533 (2016). Article  CAS  PubMed  PubMed Central  Google Scholar  * Colonne, P. M. et al. Vasodilator-stimulated phosphoprotein activity is required for _Coxiella burnetii_


growth in human macrophages. _PLoS Pathog._ 12, e1005915 (2016). Article  CAS  PubMed  PubMed Central  Google Scholar  * Lifshitz, Z. et al. Identification of novel _Coxiella burnetii_


Icm/Dot effectors and genetic analysis of their involvement in modulating a mitogen-activated protein kinase pathway. _Infect. Immun._ 82, 3740–3752 (2014). Article  CAS  PubMed  PubMed


Central  Google Scholar  * Cunha, L. D. et al. Inhibition of inflammasome activation by _Coxiella burnetii_ type IV secretion system effector IcaA. _Nat. Commun._ 6, 10205 (2015). Article 


CAS  PubMed  PubMed Central  Google Scholar  * Isaac, D. T., Laguna, R. K., Valtz, N. & Isberg, R. R. MavN is a _Legionella pneumophila_ vacuole-associated protein required for efficient


iron acquisition during intracellular growth. _Proc. Natl Acad. Sci. USA_ 112, E5208–E5217 (2015). Article  CAS  PubMed  Google Scholar  * Portier, E. et al. IroT/mavN, a new iron-regulated


gene involved in _Legionella pneumophila_ virulence against amoebae and macrophages. _Environ. Microbiol._ 17, 1338–1350 (2015). Article  CAS  PubMed  Google Scholar  * Yang, Y., Hu, M.,


Yu, K., Zeng, X. & Liu, X. Mass spectrometry-based proteomic approaches to study pathogenic bacteria-host interactions. _Protein Cell_ 6, 265–274 (2015). Article  CAS  PubMed  PubMed


Central  Google Scholar  Download references ACKNOWLEDGEMENTS The authors thank members of their laboratory for helpful discussions. They also thank their colleagues and collaborators S.


Banga, X. Shen, Y. Liu, Y. Tan, L. Xu, W. Zhu, M. Sheedlo, Y. Mao (Cornell University), R. Vance (UC Berkeley), X. Liu (Peking University), J. Samuel (Texas A&M University), C. Das


(Purdue University) and E. Nakayasu (Pacific Northwest National Laboratory) for productive collaborations and discussion. The authors apologize to colleagues whose works could not be cited


owing to space limitation. Work in the author's laboratory was supported by US National Institute of Allergy and Infectious Disease (grants AI103168 and AI105714). AUTHOR INFORMATION


AUTHORS AND AFFILIATIONS * Center of Infection and Immunity, The First Hospital, Jilin University, Changchun, 130001, China Jiazhang Qiu & Zhao-Qing Luo * Purdue Institute for


Inflammation, Immunology and Infectious Diseases, Purdue University, Jiazhang Qiu & Zhao-Qing Luo * Department of Biological Sciences, Purdue University, West Lafayette, 47907, Indiana,


USA Jiazhang Qiu & Zhao-Qing Luo Authors * Jiazhang Qiu View author publications You can also search for this author inPubMed Google Scholar * Zhao-Qing Luo View author publications You


can also search for this author inPubMed Google Scholar CORRESPONDING AUTHOR Correspondence to Zhao-Qing Luo. ETHICS DECLARATIONS COMPETING INTERESTS The authors declare no competing


financial interests. SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION S1 (FIGURE) The mechanisms of induction of host gene expression by _Legionella pneumophila_ effectors. (PDF 374 kb)


POWERPOINT SLIDES POWERPOINT SLIDE FOR FIG. 1 POWERPOINT SLIDE FOR FIG. 2 POWERPOINT SLIDE FOR FIG. 3 POWERPOINT SLIDE FOR FIG. 4 POWERPOINT SLIDE FOR FIG. 5 POWERPOINT SLIDE FOR TABLE 1


POWERPOINT SLIDE FOR TABLE 2 GLOSSARY * Lysosome A cellular compartment that is characterized by low lumen pH (4.5–5.0) and the harbouring of hydrolytic enzymes that are capable of breaking


down biomolecules. In addition to degrading biomaterials, the lysosome also has crucial roles in many important cellular processes, such as cell signalling and metabolism. * Phagolysosome A


cellular compartment that is formed by the fusion of a lysosome with a phagosome generated during phagocytosis. * Autophagosome A structure with double-layer membranes that is formed during


autophagy. * Type IV secretion systems A family of specialized transporters that consist of multiple proteins that span the two bacterial cell membranes and transfer DNA–protein complexes or


proteins from the cytosol of donor bacterial cells to the cytosol of eukaryotic or recipient bacterial cells. * Effectors Secreted proteins used by pathogenic or symbiotic microorganisms,


including bacteria, fungi and parasites, to change the physiology of the host cell, thus enabling successful colonization. * Secretory pathway A branch of the vesicle trafficking pathway


that functions to deliver newly synthesized proteins or lipids from the endoplasmic reticulum to various cellular locations, including the extracellular milieu. * Endosomal trafficking A


cellular process that is involved in the transport of internalized cargoes (bacteria, inert particles or receptor–ligand complexes) carried in the lumen of membrane-bound compartments to


their final destinations, such as the _trans_-Golgi site, the plasma membrane or the lysosome. * Endosomes Membrane-bound compartments that are formed through several complex processes


collectively known as endocytosis; it is found in the cytoplasm of almost every eukaryotic cell. Depending on its maturation stage, they can be divided into early endosomes, late endosomes


and recycling endosomes. * GTPases A large family of enzymes that can bind to and hydrolyse GTP. These enzymes often function as molecular switches that assume an on and an off status by


binding to GTP and GDP, respectively. * AMPylation A process, also known as adenylylation, in which the adenosine monophosphate (AMP) moiety from ATP is covalently linked to a substrate


protein. This modification alters the function of the target protein and can be reversed by specific enzymes. * Phosphorylcholination (PCylation). A chemical modification in which the


phosphorylcholine moiety often from CDP-choline is enzymatically attached to the backbone of a protein (mostly in eukaryotes). The modification alters the activity of the target molecules


and can be reversed by specific enzymes. * Fic proteins A large family of proteins that share a structural motif originally associated with a protein in a mutant that displays a filamentous


phenotype in media containing cyclic AMP. Those proteins that function to transfer the AMP moiety from ATP to target proteins are called AMPylators. * E3 ubiquitin ligases One of the three


enzymes that are involved in the biochemical reactions in the canonical ubiquitylation mechanism that modifies proteins by adding the ubiquitin modifier. They are important in substrate


recognition. * Retromer A complex formed by five different proteins (a heteropentamer) that anchors on the cytosolic face of endosomes; it participates in a wide range of physiological,


developmental and pathological processes by mediating retrograde transport of transmembrane cargo from endosomes to the _trans_-Golgi network. * Clathrin A protein important for the


generation of coated vesicles; it functions by forming a triskelion shape composed of three clathrin heavy chains and three light chains. Clathrin-coated vesicles selectively sort cargo at


the cell membrane, _trans_-Golgi network and endosomal compartments for multiple membrane traffic pathways. * ADP-ribosylation A biochemical reaction that transfers the ADP-ribose moiety


from nicotinamide adenine dinucleotide (NAD) to protein targets. It is often catalysed by bacterial toxins that contain a mono-ADP-ribosyltransferase (mART) motif. * Reticulon A group of


evolutionarily conservative proteins that reside predominantly in the endoplasmic reticulum; their primary role is to promote membrane curvature. * Xenophagy A form of autophagy that


specifically targets and eliminates non-host entities, such as invading pathogens. * Unfolded protein response (UPR). A cellular stress response that is activated by the accumulation of


unfolded or misfolded proteins in the lumen of the endoplasmic reticulum. It functions to alleviate the damage caused by such accumulation by halting protein translation, degrading misfolded


proteins and producing molecular chaperones that facilitate protein folding. * Inflammasome A multiprotein complex that functions to activate caspase 1 and induce inflammation in response


to cues released by invading pathogens or host cells. One major component of inflammasome is constituted by members of the nucleotide-binding oligomerization domain-like receptors (NOD-like


receptors or NLRs) that define its feature, physiological role and name. For example, the one containing NLRP3 is called the NLRP3 inflammasome. RIGHTS AND PERMISSIONS Reprints and


permissions ABOUT THIS ARTICLE CITE THIS ARTICLE Qiu, J., Luo, ZQ. _Legionella_ and _Coxiella_ effectors: strength in diversity and activity. _Nat Rev Microbiol_ 15, 591–605 (2017).


https://doi.org/10.1038/nrmicro.2017.67 Download citation * Published: 17 July 2017 * Issue Date: October 2017 * DOI: https://doi.org/10.1038/nrmicro.2017.67 SHARE THIS ARTICLE Anyone you


share the following link with will be able to read this content: Get shareable link Sorry, a shareable link is not currently available for this article. Copy to clipboard Provided by the


Springer Nature SharedIt content-sharing initiative