Capturing bacterial chromosome conformation

Capturing bacterial chromosome conformation

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Access through your institution Buy or subscribe Although chromosome organization in microorganisms has been investigated in single species, similar analyses of whole genomes in complex environmental microbial communities have been limited. Marbouty _et al_. developed a metagenomic chromosome conformation capture approach (termed meta3C) for the characterization of the average organization of individual genomes in mixed microbial communities. This approach, which is based on measuring the frequency with which two chromosomal segments come in contact, was tested on an artificial mixture of bacterial species and an environmental sample of unknown composition; the authors identified genomic regions that could be matched to a specific species and revealed the three-dimensional structure of the genomes in the mixed populations. Thus, meta3C has the potential to be used for the analysis of chromosome organization in environmental microbial communities. This is a preview of subscription content, access via your institution ACCESS OPTIONS Access through your institution Subscribe to this journal Receive 12 print issues and online access $209.00 per year only $17.42 per issue Learn more Buy this article * Purchase on SpringerLink * Instant access to full article PDF Buy now Prices may be subject to local taxes which are calculated during checkout ADDITIONAL ACCESS OPTIONS: * Log in * Learn about institutional subscriptions * Read our FAQs * Contact customer support REFERENCES * Marbouty, M. et al. Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms. _eLife_ 3, e03318 (2014) Article  Google Scholar  Download references Authors * Andrea Du Toit View author publications You can also search for this author inPubMed Google Scholar RIGHTS AND PERMISSIONS Reprints and permissions ABOUT THIS ARTICLE CITE THIS ARTICLE Du Toit, A. Capturing bacterial chromosome conformation. _Nat Rev Microbiol_ 13, 68 (2015). https://doi.org/10.1038/nrmicro3426 Download citation * Published: 16 January 2015 * Issue Date: February 2015 * DOI: https://doi.org/10.1038/nrmicro3426 SHARE THIS ARTICLE Anyone you share the following link with will be able to read this content: Get shareable link Sorry, a shareable link is not currently available for this article. Copy to clipboard Provided by the Springer Nature SharedIt content-sharing initiative

Access through your institution Buy or subscribe Although chromosome organization in microorganisms has been investigated in single species, similar analyses of whole genomes in complex


environmental microbial communities have been limited. Marbouty _et al_. developed a metagenomic chromosome conformation capture approach (termed meta3C) for the characterization of the


average organization of individual genomes in mixed microbial communities. This approach, which is based on measuring the frequency with which two chromosomal segments come in contact, was


tested on an artificial mixture of bacterial species and an environmental sample of unknown composition; the authors identified genomic regions that could be matched to a specific species


and revealed the three-dimensional structure of the genomes in the mixed populations. Thus, meta3C has the potential to be used for the analysis of chromosome organization in environmental


microbial communities. This is a preview of subscription content, access via your institution ACCESS OPTIONS Access through your institution Subscribe to this journal Receive 12 print issues


and online access $209.00 per year only $17.42 per issue Learn more Buy this article * Purchase on SpringerLink * Instant access to full article PDF Buy now Prices may be subject to local


taxes which are calculated during checkout ADDITIONAL ACCESS OPTIONS: * Log in * Learn about institutional subscriptions * Read our FAQs * Contact customer support REFERENCES * Marbouty, M.


et al. Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms. _eLife_ 3, e03318 (2014) Article  Google Scholar  Download


references Authors * Andrea Du Toit View author publications You can also search for this author inPubMed Google Scholar RIGHTS AND PERMISSIONS Reprints and permissions ABOUT THIS ARTICLE


CITE THIS ARTICLE Du Toit, A. Capturing bacterial chromosome conformation. _Nat Rev Microbiol_ 13, 68 (2015). https://doi.org/10.1038/nrmicro3426 Download citation * Published: 16 January


2015 * Issue Date: February 2015 * DOI: https://doi.org/10.1038/nrmicro3426 SHARE THIS ARTICLE Anyone you share the following link with will be able to read this content: Get shareable link


Sorry, a shareable link is not currently available for this article. Copy to clipboard Provided by the Springer Nature SharedIt content-sharing initiative