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ABSTRACT Poly(ADP-ribosyl)ation is a reversible post-translational modification synthetized by ADP-ribose transferases and removed by poly(ADP-ribose) glycohydrolase (PARG), which plays
important roles in DNA damage repair. While well-studied in somatic tissues, much less is known about poly(ADP-ribosyl)ation in the germline, where DNA double-strand breaks are introduced by
a regulated program and repaired by crossover recombination to establish a tether between homologous chromosomes. The interaction between the parental chromosomes is facilitated by meiotic
specific adaptation of the chromosome axes and cohesins, and reinforced by the synaptonemal complex. Here, we uncover an unexpected role for PARG in coordinating the induction of meiotic DNA
breaks and their homologous recombination-mediated repair in _Caenorhabditis elegans_. PARG-1/PARG interacts with both axial and central elements of the synaptonemal complex, REC-8/Rec8 and
the MRN/X complex. PARG-1 shapes the recombination landscape and reinforces the tightly regulated control of crossover numbers without requiring its catalytic activity. We unravel roles in
regulating meiosis, beyond its enzymatic activity in poly(ADP-ribose) catabolism. SIMILAR CONTENT BEING VIEWED BY OTHERS HPF1 DYNAMICALLY CONTROLS THE PARP1/2 BALANCE BETWEEN INITIATING AND
ELONGATING ADP-RIBOSE MODIFICATIONS Article Open access 18 November 2021 PARP1-DEPENDENT DNA-PROTEIN CROSSLINK REPAIR Article Open access 05 August 2024 REGULATION OF ALT-ASSOCIATED
HOMOLOGY-DIRECTED REPAIR BY POLYADP-RIBOSYLATION Article 12 October 2020 INTRODUCTION Poly(ADP-ribosyl)ation (PARylation) is an essential posttranslational modification involved in chromatin
dynamics, transcriptional regulation, apoptosis, and DNA repair1,2. PARylation is controlled by the opposing activities of PAR polymerases, PARP1 and PARP2 (PARPs), and PAR glycohydrolase
(PARG)3,4. The activities of PARPs are crucial for an efficient DNA damage response, as loss of PARP1 or PARP2 leads to hypersensitivity to genotoxic stress and impaired spermatogenesis in
mice, while the combined deficiencies of PARP1 and PARP2 cause embryonic lethality2,5. Likewise, the PARG knockout is embryonic lethal in mammals and depleted cells become sensitive to
ionizing radiation (IR) and show aberrant mitotic progression1,6. Moreover, no orthologs are present in yeast, and therefore our understanding of the roles of PARylation during germ line
development has been limited. _Caenorhabditis elegans (C. elegans) parg-1/PARG_ null mutants are viable and fertile7,8, allowing us to analyse its function(s) during gametogenesis. It has
been previously shown that _parp-1/-2_ and _parg-1_ mutants display hypersensitivity to IR exposure7,9,10 however their roles during gametogenesis have remained poorly investigated. In
sexually reproducing species, preservation of ploidy across generations relies on meiosis, a specialized cell division program which promotes the generation of haploid germ cells11,12. The
formation of crossovers (CO) is essential for faithful chromosome segregation into the gametes13,14. Connected parental homologous chromosomes (also called bivalents) can cytologically be
detected in diakinesis nuclei and are thus a readout for the success of the CO establishment. COs arise by the generation and homologous recombination-mediated repair of programmed DNA
double-strand breaks (DSB) effectuated by the evolutionarily conserved topoisomerase VI-like protein Spo1115. The activity of Spo11 is tightly regulated to ensure the correct timing,
placement, and number of DSBs/COs along meiotic chromosome axes. In _C. elegans_, several factors involved in promoting meiotic DSBs have been identified, and those include MRE-11, HIM-5,
HIM-17, DSB-1, DSB-2, and XND-116,17,18,19,20,21. Of these, XND-1 and HIM-17 are known to also influence germline chromatin structure18,19. DSB-1 and DSB-2 appear to have roles in
maintaining DSB competency throughout early pachytene20,21. MRE-11 functions both in DSB formation and immediately downstream in end resection16,22; HIM-5 and DSB-2 have also recently been
shown to couple DSB formation with HR-mediated repair23. Both the distribution and the abundance of DSBs and COs undergo multiple levels of regulation. In all organisms studied, the number
of DSBs exceeds the number of COs, with ratios reaching 10:1 in some cases24. The supernumerary DSBs use HR-like mechanisms to be repaired with high fidelity, with repair intermediates
shunted into non-CO (NCO) outcomes. Importantly, a robust inter-homolog repair bias ensures formation of the obligate CO in the germ cells, which in _C. elegans_ occurs even under
subthreshold levels of DSBs17,25,26. CO interference describes the phenomenon whereby CO-committed intermediates influence nearby DSBs to be repaired as NCOs, ensuring that COs are
well-spaced across the genome11,27. In _C. elegans_, CO interference is nearly complete, as each chromosome pair receives, in most cases, only one CO28. On the autosomes of the worm, COs
occur preferentially on the chromosome arms, away from the gene-rich region in the center of the chromosomes; while they are more evenly dispersed on the heterochromatic-like X chromosome29.
While CO interference explains much about CO distribution in most organisms, some COs are known to arise from an interference-independent pathway. The COs generated through
interference-dependent (Class I) and interference-independent mechanisms (Class II) have distinct genetic requirements, driven by MutS-MutL and Mus81 homologs respectively30. Genetic
evidence suggests that, in _C. elegans_, only Class I COs are present31,32. Nevertheless mutants displaying interference-insensitive COs have been reported27,33, however, these are still
dependent on the canonical MSH-5/COSA-1-mediated CO pathway and they can be detected by genetic measurements of recombination25. CO-repair takes place in the context of the synaptonemal
complex (SC), a tripartite proteinaceous structure composed of axial and central elements, arranged as a protein zipper between each pair of homologs. The SC maintains homolog associations
and facilitates inter-homolog exchange of DNA during repair34. Crosstalk between the SC and COs is essential for modulating recombination. Incomplete synapsis dramatically weakens CO
interference and additional COs _per_ chromosome can be observed26,35. Conversely, reduced, but not absent, recombination levels cause premature desynapsis of the chromosome pairs that fail
to establish a CO19,36,37. Chromosome axis components, which in _C. elegans_ include the HORMA-domain proteins HTP-3, HTP-1/-2, and HIM-338,39,40, influence both the abundance of DSBs and
the regulation of their repair. In this study, we show an unexpected involvement of PARG-1 in influencing the dynamics of induction and repair of meiotic DSBs, and we identify a role in
promoting CO formation. We found that PARG-1 functions independently of the known DSB initiation factors in efficient formation of DSBs, but it cooperates with HIM-5 to regulate global
crossover numbers. PARG-1 is detected throughout the germ line and undergoes a progressive recruitment along synapsed chromosomes, culminating in the retraction to the short arm of the
bivalent and enrichment at the putative CO sites. In absence of _parg-1_, we observe an accumulation of PAR on the meiotic chromosomes, which is suppressed by abrogation of PARP-1 and PARP-2
function. We report the association of PARG-1 with numerous key proteins composing the meiosis-specific structure of the SC both by cytological and biochemical analysis. Surprisingly, we
found that PARG-1 loading, rather than its catalytic activity, is essential to exert its function during meiosis. Our data strongly suggest that PARG has scaffolding properties which are
important for the fine-tuning of meiotic recombination events. RESULTS PARG-1 IS THE MAIN PAR GLYCOHYDROLASE IN THE GERM LINE The _C. elegans_ genome encodes two orthologs of mammalian PARG,
PARG-1, and PARG-27,8,41. Both mutants are hypersensitive to IR exposure and more recently it was shown that _parg-2_ is involved in the regulation of HR-dependent repair of ectopic DSBs by
influencing the extent of resection upon IR41. To explore possible functional links or redundancies between _parg-1_ and _parg-2_, we used CRISPR to engineer _parg-2_ null mutations in both
the wild type (WT) and _parg-1(gk120)_ deletion mutant backgrounds (Fig. 1a). In contrast to mammalian PARG, _C. elegans parg-1_ and _parg-2_ are largely dispensable for viability (Fig.
1b). However, abrogation of _parg-1_, but not _parg-2_ function, led to increased levels of embryonic lethality and segregation of males (which arise from X-chromosome nondisjunction42).
Assessment of viability, brood-size, and segregation of male progeny in _parg-1 parg-2_ double mutants did not reveal synthetic phenotypes but rather recapitulated the _parg-1_ single
mutant, indicating that _parg-2_ does not exert prominent roles in an otherwise WT background and cannot compensate the lack of _parg-1_ function (Fig. 1b). To confirm a role of PARG-1 and
PARG-2 in PAR catabolism, we investigated PAR accumulation in the mutant animals. Because PAR undergoes a rapid turnover, it cannot be detected in WT germ lines (Fig. 1c). By contrast, we
detected PAR at all stages of meiotic prophase I in _parg-1_ mutants. Since PAR accumulation was neither seen in _parg-2_ mutants nor further enhanced in _parg-1 parg-2_ (Fig. 1c), we infer
that PARG-1 is the major PARG in the worm germ line. Removal of the PAR polymerases _parp-1/-2_, suppressed accumulation of PAR in _parg-1_ mutant germ cells (Fig. 1d). Interestingly, we
found that while abrogation of _parp-1_ function reduced PAR signal intensity to roughly 30%, lack of _parp-2_ alone was sufficient to bring PAR staining to background levels. Since both
_parp-1(ddr31)_ and _parp-2(ok344)_ mutant alleles are null, this data suggests that PARP-2 is mainly responsible for the synthesis of PAR during _C. elegans_ meiotic prophase I. Since PAR
accumulates at sites of DNA damage in somatic cells43,44, we asked whether its synthesis in meiotic prophase nuclei was dependent on the formation of meiotic DSBs. Surprisingly, we found
that in the gonads of _parg-1 spo-11_ double mutants, in which no programmed DSBs are made, PAR was still detectable within prophase I nuclei (Supplementary Fig. 1A), indicating that its
production occurs independently of physiological DNA damage during gametogenesis. PARG-1 LOADING DURING MEIOTIC PROPHASE I REQUIRES HTP-3 To detect PARG-1, we raised a _C. elegans_-specific
anti-PARG-1 monoclonal antibody that we used in western blot analysis on both total and fractionated protein extracts (Fig. 2a and Supplementary Fig. 1B). This antibody confirmed that
_parg-1(gk120)_ is a null allele. We found expression of PARG-1 in both the cytosol and the nucleus in WT animals (Fig. 2a), as similarly observed in mammalian mitotic cells45,46,47. Since
localization of PARG is not known in meiocytes, we employed CRISPR to tag the 3′ end of the endogenous _parg-1_ locus with a GFP-tag. We assessed the functionality of the fusion protein by
monitoring PAR accumulation in the gonad, embryonic lethality, and male progeny, none of which showed any differences compared to WT, indicating that PARG-1::GFP is catalytically active and
fully functional (Fig. 1b and Supplementary Fig. 1A). Moreover, western blot analysis employing either anti-PARG-1 or anti-GFP antibodies on fractionated extracts from _parg-1::GFP_ worms
revealed identical expression as seen with untagged PARG-1 (Fig. 2b), further confirming that the GFP-tag did not affect PARG-1 stability or expression. Immunofluorescence analyses showed
that PARG-1::GFP is first detected in premeiotic and leptotene/zygotene nuclei and then became progressively enriched along chromosomes throughout pachytene (Fig. 2c). In late pachytene,
PARG-1::GFP showed retraction toward the short arm of the bivalent (a chromosomal subdomain formed in response to CO formation) which was particularly evident at diplotene. In nuclei at the
diakinesis stage, PARG-1::GFP was detectable mostly in the nucleoplasm (Supplementary Fig. 1C). Co-staining with axial proteins HTP-1/HTP-3 and the central SC component SYP-138,39,48
revealed recruitment of PARG-1::GFP onto synapsed chromosomes and confirmed its retraction to the short arm of the bivalent in late pachytene cells (Fig. 2d), which also harbors the chiasma
and the central elements of the SC49,50. Overlapping localization of PARG-1::GFP with both the CO-promoting factor COSA-1 and SYP-1 (Fig. 2e) further proved recruitment of PARG-1 to this
chromosomal subdomain, similar to SC central elements48,51,52,53,54. In CO-defective _cosa-1_ mutant animals, we observed that the initial loading of PARG-1::GFP to the SC was unaffected,
but no retraction was observed, confirming that the redistribution of PARG-1 is dependent on bivalent formation (Fig. 2f). Based on its localization to the SC, we tested whether PARG-1::GFP
loading was dependent on chromosome axis or synapsis establishment. Loss of _htp-3_, encoding a HORMA domain-containing protein essential for axis morphogenesis38, disrupted PARG-1::GFP
localization, resulting in nucleoplasmic accumulation and occasional association with SYP-1-containing polycomplexes (Fig. 2g). By contrast, PARG-1::GFP exhibited linear staining along the
chromosome axes in synapsis-deficient _syp-2_ mutants (Fig. 2h), where only axial elements are loaded onto the chromosomes34,38,39. Thus, we conclude that PARG-1 is recruited to the SC in an
HTP-3-dependent manner and its localization changes in response to CO-mediated chromosome remodeling. Since PARG-1 localizes to chromosome axes and requires HTP-3 for loading, we wondered
whether these factors formed protein complexes in vivo. To test for their possible association, we performed immunoprecipitation assays by pulling down HTP-3::GFP55 and proceeded with
western blot analysis to detect PARG-1. Robust interaction between HTP-3::GFP and PARG-1 was observed (Fig. 2i). Further, to assess whether PARG-1 establishes physical interactions with
additional chromosome axis components as well, we also performed co-immunoprecipitation experiments pulling down HTP-1::GFP and REC-8::GFP56,57. Western blot showed that PARG-1
co-immunoprecipitated with both HTP-1 and REC-8 (Fig. 2j). Extending this analysis to the central elements of the SC component, we found that PARG-1 could be also pulled down with
GFP::SYP-358 (Fig. 2i). Together with our localization studies, these biochemical data indicate that PARG-1 is an intrinsic component of the SC. PARG-1 INFLUENCES PROCESSING OF RECOMBINATION
INTERMEDIATES Given PARG-1 recruitment along the SC and enrichment at the presumptive CO sites, we sought to investigate whether synapsis and CO formation are impaired in _parg-1_ mutants.
Using antibodies directed against HTP-3 and SYP-1 to monitor the establishment of the SC, we observed no difference between the WT and _parg-1_ mutants (Supplementary Fig. 2A). DAPI-staining
of diakinesis nuclei revealed the correct complement of six bodies as in WT worms (Supplementary Fig. 2B). Thus, we infer that _parg-1_ is dispensable for synapsis and CO formation. We next
addressed whether loss of _parg-1_ would impact the formation and processing of recombination intermediates by analysing the dynamic behavior of the recombinase RAD-51, which forms discrete
chromatin-associated foci with a distinct kinetics of appearance and disappearance34,59 (Fig. 3a, b). While in WT worms we see a progressive increase of RAD-51, peaking in early-mid
pachytene (zone 4) and disappearing by late pachytene (zone 6), in _parg-1_ mutants, we observed the delayed formation of RAD-51 foci with progressive accumulation at the pachytene stage.
RAD-51 foci formation was entirely suppressed by SPO-11 removal, suggesting specific abnormalities in the induction and/or processing of meiotic DSBs rather than spontaneous or unscheduled
damage arising during mitotic replication (Fig. 3a, b). It has been previously shown that during meiosis, NHEJ is repressed in order to allow for CO repair by HR. The inappropriate
activation of NHEJ at these stages can impede RAD-51 loading22,60,61,62. Therefore, we wondered whether the delayed RAD-51 loading in _parg-1_ mutants could result from NHEJ activation. To
test this hypothesis, we removed the _C. elegans_ ortholog of the mammalian heterodimeric KU complex subunit _cku-80/Ku80_, which is essential for NHEJ function. _cku-80; parg-1_ double
mutants revealed no differences in the early loading of RAD-51 compared to _parg-1_ mutants, indicating that improper activation of NEHJ is likely not the cause of defect in RAD-51 loading
(Supplementary Fig. 3A). However, we found a roughly 2-folds increase in the number of RAD-51 foci in late pachytene nuclei of _cku-80; parg-1_ doubles compared to _parg-1(gk120)_ mutants,
indicating that a fraction of recombination intermediates formed in absence of _parg-1_ may be repaired by NHEJ. Next we decided to investigate whether PARG-1 might have a role in the
regulation of DSB formation. As tools to directly quantify meiotic DSBs are presently not available in _C. elegans_, we took advantage of a genetic epistasis analysis to determine if
_parg-1_ has a role in DSB formation. In diakinesis nuclei, DSB resection-defective mutants, such as _com-1/CtIP/Sae2_ and _mre-11(iow1)/Mre11_, display massive chromatin clumps and
occasional chromosome fragments that arise from aberrant repair of meiotic DSBs. Accordingly, these clumps and fragments are fully suppressed in the DSB-devoid _spo-11_ mutants16,22,63.
Similarly, in the _com-1; parg-1_ and _parg-1; mre-11(iow1)_ double mutants, we found that the vast majority of diakinesis nuclei contained twelve intact univalents (Fig. 3c, d). These
results are consistent with a role for PARG-1 in DSB induction but could also reflect a function for _parg-1_ in targeting breaks to alternative repair pathways. To distinguish between these
possibilities, we exposed the aforementioned double mutants to gamma irradiation (IR) to ectopically induce DSBs. We reasoned that if _parg-1_ mutants were defective solely in DSB
induction, the breaks induced by IR should restore the aberrant chromosome morphology typical of _com-1_ and _mre-11_. By contrast, if _parg-1_ has a role in repair pathway utilization, the
IR-induced breaks would still be shunted into an alternative pathway and the appearance of DAPI bodies would remain unchanged after IR exposure. Diakinesis nuclei of irradiated _com-1;
parg-1_ reverted to the _com-1_-like (chromosome clumping-fusion) phenotype, supporting a putative role for PARG-1 in DSB induction. By contrast, _parg-1; mre-11(iow1)_ were
indistinguishable from non-irradiated controls, indicating that PARG-1 may also influence DNA repair pathway choice when _mre-11_, but not _com-1_, function is compromised (Fig. 3c, d).
Together, these results suggest an involvement of PARG-1 in promoting both the formation and repair of meiotic DSBs. PARG-1 AUGMENTS THE FORMATION OF MEIOTIC DSBS To further explore PARG-1’s
putative involvement in promoting DSBs, we tested its ability to genetically interact with mutations that are impaired in DSB induction. We combined the _parg-1(gk120)_ deletion with two
hypomorphic _him-17_ alleles and with a _him-5_ null mutation that reduce, but do not completely eliminate, SPO-11-dependent DNA breaks17,18. Consistent with published results, we observed
that these single mutants displayed reduced numbers and delayed formation of RAD-51 foci17,18, that was further diminished in both _parg-1; him-5_ and _parg-1; him-17_ double mutants
(Supplementary Fig. 3B–D). To rule out that these phenotypes could be due to secondary mutations present in the _parg-1(gk120)_ mutant background, we engineered the identical deletion
present in the _parg-1(gk120)_ worms, giving rise to the _parg-1(ddr50)_ allele (Fig. 1a). Like _parg-1(gk120)_ worms, the _parg-1(ddr50)_ mutants appeared to be null, as no PARG-1 protein
was detected in western blot analysis carried out on total protein extracts (Supplementary Fig. 1B). Quantification of RAD-51 foci numbers in _parg-1(ddr50)_ and _parg-1(ddr50); him-5_
mutants was comparable to _parg-1(gk120)_ and _parg-1(gk120); him-5_, respectively, indicating that the aberrant RAD-51 expression profile specifically arises from _parg-1_ loss of function
rather than unrelated mutations (Supplementary Fig. 3E). The defects in RAD-51 filament formation observed in the _parg-1; him-17_ and _parg-1; him-5_ double mutants were correlated with
defective loading of pro-CO factors such as HA::RMH-1, GFP::MSH-5 and OLLAS::COSA-1 (Fig. 4b, c and Supplementary Fig. 4) as we would expect for mutations that impair DSB formation. Analysis
of diakinesis nuclei revealed an extensive lack of chiasmata (Fig. 4d) and enhanced embryonic lethality (Supplementary Fig. 3F) in the double mutants due to defects in CO repair. These
phenotypes were observed for both _parg-1(gk120)_ and _parg-1(ddr50)_ alleles in combination with _him-5_ mutation, further ruling out possible involvement of secondary mutations. Loading of
RMH-1, MSH-5, and COSA-1, as well as bivalent formation, were largely, although not completely, rescued by IR exposure (Fig. 4b–d and Supplementary Fig. 4), further corroborating that the
lack of COs was due to impaired DSB formation. Abrogation of PARG-1 function also exacerbated the CO defect observed in both young (day #1) and old (day #2) _dsb-2_ mutants (Supplementary
Fig. 3G), which display an age-dependent loss in the proficiency to induce DSBs21. These results indicate that loss of _parg-1_ function impairs a parallel, _him-17-, him-5_, and
_dsb-2_-independent pathway for DSB induction. To quantify DSBs that progress to strand exchange intermediates, we took advantage of the _rad-54_ mutation in which removal of RAD-51 from
D-loops cannot occur properly and the RAD-51 foci that accumulate are thought to reflect the total number of DSBs that are made26,64,65. We generated the _rad-54; parg-1_ double mutants and
analysed RAD-51 dynamics. Strikingly, the number of RAD-51-labeled recombination intermediates was greatly reduced in the double mutant (Supplementary Fig. 3H). We also found that a large
number of diakinesis nuclei contained normal appearing DAPI-bodies (Supplementary Fig. 3I), in stark contrast to _rad-54_ animals, where chromosomes morphology is highly aberrant23. RAD-54
absence both impairs RAD-51 turnover and prolongs the “window of opportunity” during which DSBs can be made20,21,26, therefore the phenotypes in the _rad-54; parg-1_ double mutants can be
explained as a consequence of reduced DSBs but also as an alternative form of repair, further reinforcing a possible dual role for PARG-1 in the formation and the processing of the
recombination intermediates. PARG-1 INTERACTS WITH MRE-11 To further interrogate PARG-1 function in DSB formation, we next sought to investigate the interplay between PARG-1 and
DSB-promoting factors. To this end, we assessed the localization of the pro-DSB factors HIM-5::3xHA, HIM-17::3xHA, DSB-2, and XND-1 in _parg-1_ mutants. We observed no gross defects in
localization compared to the controls (Supplementary Fig. 5A–D), which suggests that PARG-1 is not required for the loading of these pro-DSB factors. Conversely, PARG-1::GFP loading appeared
normal in _him-5_, _dsb-2_, and _him-17_ (null and hypomorph alleles) mutant backgrounds. The only difference compared to WT is the lack of retraction of PARG-1::GFP to the short arm of the
bivalent, which is a consequence of the lack of COs caused by these mutations (Supplementary Fig. 5E) similar to _cosa-1_ mutations (described above). Given the synergistic phenotypes
observed in the double mutants and the lack of defects in the loading/expression of DSB-promoting proteins, we conclude that PARG-1 supports formation of DSB via alternative pathway(s) to
the known pro-DSB factors in _C. elegans_. It has been previously shown that DSB formation in worms is also promoted by the axial component HTP-3, possibly through its interaction with the
MRN/X complex factor MRE-11, known to be involved in meiotic break induction22,38,66. Since we already showed an interaction between HTP-3::GFP and PARG-1 (Fig. 2i), we now wanted to address
if this extended to an association with MRE-11. Western blot analysis for PARG-1 on GFP pull downs performed with the _mre-11::GFP_ transgene67 also showed co-immunoprecipitation (Fig. 4e).
This suggests that the PARG-1-mediated activity in promoting meiotic DSBs may intersect the HTP-3-MRE-11 axis. PARG-1 AND HIM-5 MODULATE CROSSOVER NUMBERS While the loading of pro-CO
factors was largely rescued in the irradiated _parg-1; him-5_ double mutants, over half of the diakinesis nuclei still displayed univalents (Fig. 4d), indicating substantial, yet incomplete,
restoration of chiasmata. The dose employed in our irradiation experiments (10 Gy) sufficed to fully elicit bivalent formation in _him-5_, _spo-11_, _parg-1 spo-11_ (Fig. 4d), and _spo-11;
him-5_68. Therefore, we conclude that additional CO execution steps are defective in _parg-1; him-5_. Importantly, this phenotype was not observed in _parg-2; him-5_ double mutants, in which
the number and structure of DAPI bodies resembled _him-5_ single mutants both before and after exposure to IR (Supplementary Fig. 6). To assess whether _parg-2_ provided activity in absence
of _parg-1_, we generated the _parg-1 parg-2; him-5_ triple mutants and analysed diakinesis nuclei before and after exposure to IR, which did not differ from the _parg-1; him-5_ double
mutant (Supplementary Fig. 6). This further corroborates that the recombination defects observed in _parg-1; him-5_ are a consequence of impaired _parg-1_ function and that _parg-2_ does not
play significant roles under contemporary _him-5_ deficiency. The SC is a dynamic structure that responds to the presence or absence of (as yet unidentified) CO intermediates in the
nucleus. When COs are made, they stabilize the SC in _cis_36,37,69. In genetic backgrounds with reduced DSB induction, such as those described above, the chromosome pairs lacking a CO
undergo desynapsis at a late pachytene stage, whereas in mutants that completely lack COs, homologs remain fully synapsed, but the SC subunits are more labile36,37. Given both the partial
rescue of chiasmata formation in _parg-1; him-5_ double mutants after IR and also the localization of PARG-1 to the SC, we sought to determine if CO designation and SC dynamics are decoupled
by simultaneous loss of both HIM-5 and PARG-1 functions. In unirradiated _him-5_ mutant worms, the sole absence of a CO on chromosome X caused its extensive desynapsis in late pachytene
nuclei (Fig. 5a, c), recapitulating previous observations37. By contrast, in _parg-1; him-5_ double mutants, the majority of nuclei showed full synapsis (Fig. 5a–c), in agreement with the
fact that desynapsis is not triggered when CO establishment is fully abrogated36,37. In support of this interpretation, we show that nuclei containing fully synapsed chromosomes displayed no
COSA-1 loading in unirradiated _parg-1; him-5_ double mutants (Fig. 5d). Immunostaining for H3K4me2, a histone modification that shows specific enrichment on the autosomes, but not on the X
chromosome70, further revealed that the X chromosome was fully synapsed in _parg-1; him-5_ doubles, consistent with the lack of a CO, and in stark contrast to _him-5_ or _parg-1_ single
mutants (Fig. 5c). We next wanted to address whether SC stabilization and CO formation are coordinated in the _parg-1; him-5_ double mutants after irradiation, where six COSA-1 foci were
observed (Fig. 5b) but univalents resulted (Fig. 4d). For this analysis, we undertook a time course analysis, examining pachytene nuclei 8 and 17 h after irradiation. Six COSA-1 foci were
observed in _parg-1_ mutants both before and after IR; however, we found a mild, albeit statistically significant, reduction in the number of nuclei with full synapsis (Fig. 5a), suggesting
that PARG-1 might exert roles in promoting efficient establishment or stabilization of the SC. In the _him-5_ single mutant, 10 Gy of IR is sufficient to both rescue COSA-1 loading and to
suppress X-chromosome desynapsis, as observed both 8 and 17 h post-IR, as shown previously37. In _parg-1; him-5_, COSA-1 foci numbers were also largely rescued at 8 h post-IR and remained
steady at 17 h post-IR (Fig. 5b). However, desynapsis was observed at 8 h post-IR and synapsis was further reduced 17 h after irradiation (Fig. 5a). Strikingly, a substantial number of
nuclei exhibited desynapsis, yet showed the full complement of six COSA-1 foci (8 h = 52% and 17 h = 74.3%) (Fig. 5d, e), a situation never described in other meiotic mutants. COSA-1 foci
were never associated with unsynapsed regions. The fact that these nuclei contained six COSA-1 foci, as in WT animals, suggests that some chromosomes bear additional COSA-1 marked CO events.
These results revealed that the global regulation of CO-mediated repair is profoundly perturbed in the absence of PARG-1 and HIM-5 functions. To further characterize the defects in _parg-1;
him-5_ mutants, we examined the meiotic progression marker phospho-SUN-1S871. In WT animals, SUN-1S8 is phosphorylated in leptotene/zygotene and dissipates at mid- pachytene72. The lack of
DSBs or impaired homologous recombination-mediated repair trigger retention of phospho-SUN-1S8 at the nuclear envelope until the late pachytene stage72. In DSB-defective mutants, but not in
mutants with impaired recombination (such as _cosa-1_), delayed removal of phospho-SUN-1S8 is rescued by exogenous DSB induction20,21,37,72. Since _parg-1; him-5_ double mutants appear to
carry defects in both DSB induction and repair, we analysed phospho-SUN-1S8 localization before and after IR exposure to assess whether these phenotypes could be uncoupled by phospho-SUN-1S8
dynamics. _parg-1_ mutants displayed mild prolongation of phospho-SUN-1S8 staining (Supplementary Fig. 7), consistent with the delayed accumulation of RAD-51 foci (Fig. 3a and Supplementary
Fig. 3). _him-5_ and _parg-1; him-5_ mutants showed comparable, prolonged phospho-SUN-1S8 staining under unchallenged growth conditions, consistent with defective DSB induction and
recombination. While IR exposure fully suppressed the persistence of phospho-SUN-1S8 in the _him-5_ as expected, it only mildly suppressed it in _parg-1; him-5_ (Supplementary Fig. 7). The
inability of IR to suppress phospho-SUN-1S8 accumulation further reinforces the conclusion that lack of both PARG-1 and HIM-5 impairs both meiotic DSB formation and repair. PARG-1 SHAPES THE
RECOMBINATION LANDSCAPE Given the involvement of _parg-1_ in regulating not only DSB formation, but also homology-mediated repair, we investigated the recombination frequency in different
genetic intervals on chromosome I and V by monitoring SNP markers in Bristol/Hawaiian hybrids, which allowed us to assess both CO numbers and their position73. We found a striking increase
of COs in the central regions of both chromosomes (Fig. 5f, g), where COs are usually absent in the WT74. In addition, double and triple COs were observed, albeit at a low frequency. These
results revealed that impaired _parg-1_ function impacts the global levels and distribution of COs and weakens CO interference in _C. elegans_. PARG-1 ACTS INDEPENDENTLY OF ITS CATALYTIC
ACTIVITY We next sought to investigate whether PARG-1 catalytic activity is necessary to exert its function during meiosis. To this end, we generated a _parg-1_ “catalytic-dead” mutant
(referred to as _parg-1(cd)_ hereafter) using CRISPR to mutate two glutamates in the catalytic domain (E554, 555A). These amino acids are conserved throughout evolution and were shown to be
essential for PARG activity in vitro in both mammals and nematodes7,44,75. Immunostaining analysis in _parg-1(cd)_ and _parg-1(cd)::GFP_ revealed accumulation of PAR on meiotic chromosome
axes as in _parg-1(gk120)_ null mutants, indicating that also in vivo E554-E555 are necessary for PAR removal (Fig. 6a). Western blot analysis showed that the overall levels of both
PARG-1CD::GFP and untagged PARG-1CD were increased, ruling out possible artefacts due to the addition of GFP (Fig. 6b). The blots were also probed with anti-PAR antibodies and this confirmed
that both strains have compromised glycohydrolase activity. PARG-1CD::GFP was expressed and loaded in meiocytes (Fig. 6c) but displayed prolonged localization along the chromosomes in late
pachytene cells, were PARG-1 normally is retained mostly at the short arm of the bivalent in control animals (Fig. 2). To assess whether the catalytic activity of PARG-1 was required for the
induction and/or repair of meiotic DSBs, we analysed the _parg-1(cd); him-5_ double mutants as described above. X-chromosome desynapsis (Fig. 6d–f) was suppressed upon IR exposure in both
_parg-1(cd); him-5_ and _him-5_ mutants, in contrast to the desynapsis seen in _parg-1(gk120); him-5_ after IR (Fig. 5). Offspring viability was only mildly reduced compared to _him-5_
mutants (Fig. 6g). This indicates robust fidelity of chromosome segregation in contrast to the _parg-1(gk120); him-5_ double mutants. Moreover, analysis of recombination frequency in the
_parg-1(cd)_ revealed a recombination landscape that was similar to control animals (Fig. 5f, g), in contrast to the central shift observed in _parg-1(gk120)_ nulls, further corroborating
that the catalytic activity of PARG-1 is largely dispensable to regulate recombination. These results suggest that PARG-1 loading onto chromosomes and/or a non-catalytic function of PARG-1
are essential to avert recombination defects in the absence of HIM-5. This interpretation was further reinforced by the observation that the simultaneous removal of _parp-1_ and _parp-2_ did
not rescue CO formation in _parg-1(gk120); him-5_ mutants (Fig. 6h, i), indicating that CO defects are independent of PAR. Thus, we conclude that the glycohydrolase activity of PARG-1 is
not required to promote induction of meiotic DSBs and their homologous recombination-mediated repair. DISCUSSION PARylation has been extensively studied in the context of the DNA damage
response in mitotic mammalian cells, where it facilitates the repair of DNA lesions by promoting both the recruitment of repair factors and mediating local chromatin relaxation around damage
sites76,77,78,79. In contrast to PARP1/2, the functions of PARG have been much less investigated due to the lack of a suitable model system, since PARG null mutants are embryonic lethal in
mammals4. We found that the _C. elegans_ PARG-1 regulates DSB induction, in parallel to the so far known HIM-17/HIM-5/DSB-1/DSB-2-dependent routes. Moreover, our data demonstrate that PARG-1
regulates homology-directed repair of DSBs by operating within a functional module with HIM-5 to ensure the efficient conversion of recombination intermediates into post-recombination
products, ultimately controlling global CO numbers. Our cytological analysis, in combination with co-immunoprecipitation assays (Fig. 2), identified PARG-1 as an intrinsic component of the
SC, where it is recruited via interaction with the chromosome axis protein HTP-3. Studies in mammalian mitotic cells reported nucleoplasmic localization of PARG and robust recruitment onto
the DNA lesions induced by laser microirradiation43,44. The association with a meiosis-specific structure such as the SC therefore suggests distinct functional regulation in meiotic cells.
Interestingly, PARG-1 retracts to the short arm of the bivalent and becomes enriched with SYP proteins at the presumptive CO sites in late pachytene nuclei (Fig. 2c, d), a localization also
described for DNA repair and CO-promoting factors51,52,53,54. Nevertheless, abrogation of synapsis did not impair loading of PARG-1 along the chromosomes, a prerogative typically observed
for axial rather than central components of the SC38,39,40,49. This would suggest that PARG-1 may be targeted to both lateral and central elements of the SC or shift from the former to the
latter upon CO-mediated chromosome remodeling. In support of a dynamic model of PARG-1 localization, PARG-1 was found in protein complexes both with HTP-1, HTP-3, and REC-8, all proteins
localizing to chromosome axes38,50,80, and also with SYP-3, which is a component of the central part of the SC81. We believe that the localization of PARG-1 to the chromosome axes and its
interaction with HTP-3 might hold crucial functional implications for promoting formation of meiotic DSBs and/or affecting their repair outcome. Many axial proteins, including _C. elegans_
HTP-3, have been shown to directly influence abundance of DSBs during meiosis in several organisms38,82, while others, such as HTP-1 and HIM-339,40, have been directly involved in modulating
repair. Therefore PARG-1 might exert its pro-DSB functions by operating from within the SC. An activity of PARG-1 in promoting meiotic DSB formation by directly regulating pro-DSB factors
is less likely, since the synergistic effects between _parg-1_ and _him-17-him-5-dsb-2_ mutants (Fig. 4, Supplementary Fig. 5) clearly place PARG-1 in a parallel, distinct pathway.
Consistently, expression and localization of PARG-1 and HIM-17, HIM-5, or DSB-2 were not mutually dependent (Supplementary Fig. 5). We cannot rule out the possibility that PARG-1 may
contribute to DSB formation by modulating SPO-11 activity or its recruitment to the presumptive DNA break sites, which we could not address due to unavailability of tools for SPO-11 analysis
in worms. An additional argument in support of a model where interaction with HTP-3 might be key for PARG-1-mediated pro-DSB function, comes from its co-immunoprecipitation with MRE-11
(Fig. 4e), a proven interaction partner of HTP-338. MRE-11 holds important roles in break resection across species and in _C. elegans_ also in break formation22,83. MRE-11 has been invoked
as a putative substrate intersected by HTP-3 function in inducing meiotic breaks38. Therefore, PARG-1 might act together with HTP-3 and MRE-11 to ensure normal levels of breaks. The fact
that _parg-1; mre-11_ animals displayed such different phenotypes compared to _com-1; parg-1_ further highlights a complex, yet undetermined, functional interaction between these two factors
that might impact more than only DSB formation. As abrogation of _parg-1_ activity suppresses chromosome fusions triggered by aberrant resection or by impaired _rad-54_ function, a
regulatory activity exerted by PARG-1 on DNA repair pathway choice is a possible scenario. The generation of unstructured chromosome masses in diakinesis nuclei in both _mre-11(iow1)_ and
_rad-54_ mutants can be suppressed by PARG-1 removal and leads to the formation of achiasmatic chromosomes. This would be consistent with a repair switch toward the sister chromatid, thus
PARG-1 might selectively direct DSB repair towards the homologous chromosome. PARG-1 might operate through its localization along the SC, which has been shown to strongly influence meiotic
DNA repair. More experimental analysis will be necessary to unravel the roles of PARG-1 during repair. Our analysis also revealed that PARG-1, both independently and in combination with
HIM-5, plays important roles in the global regulation of meiotic recombination. In fact, _parg-1_ mutants show a profoundly perturbed recombination landscape, as distribution of COs
displayed a marked shift towards the center of the autosomes (Fig. 5), a chromosome domain normally devoid of COs in WT animals29. This feature has also been observed in mutants with reduced
levels of bivalent formation or aberrant DSB repair17,53,84,85,86. Moreover, CO interference appeared weakened in absence of _parg-1_, suggesting a diminished stringency in the control of
CO numbers. The intermediates formed upon abrogation of _parg-1_ function are nonetheless fully competent to be processed as COs, as long as HIM-5 function is preserved. In fact, while
bivalent formation was fully restored in _parg-1; him-17_ double mutants upon IR exposure (Fig. 4d) (arguing for a rescue of reduced DSB levels), diakinesis of irradiated _parg-1; him-5_
mutant worms showed only a partial restoration of chiasmata, highlighting a repair defect as well (Fig. 4d). The mutual requirement of PARG-1 and HIM-5 in the reciprocal mutant background
suggests the presence of a repair mechanism that relies on these two factors in order to efficiently complete inter-homolog recombination repair. Both _him-5_ and _dsb-2_ exert regulatory
functions on DNA repair pathway choice during gametogenesis23 and our work also highlights _parg-1_ as an important factor operating within such a process. Simultaneous abrogation of
_parg-1_ and _him-5_ function caused much more severe aberrations than just reduced recombination: we found that IR exposure restored COSA-1 loading to the WT levels (six foci/nucleus) in
pachytene cells (consistent with impaired break formation); nevertheless large portions of chromatin were devoid of SYP-1/COSA-1 in many of these nuclei. These data indicate that additional
COs have been designated on remaining, SC-associated chromosomes (Fig. 5). Previous studies in ex vivo somatic cells suggested possible functions of PARG that are independent of its
catalytic activity or PAR synthesis44. Our data show that in catalytically impaired _parg-1(cd)_ mutants, which consistently accumulate PAR as in _parg-1(gk120)_ nulls (Fig. 6), the inactive
protein was recruited at higher levels and displayed delayed redistribution along the chromosomes in late pachytene nuclei. This is in agreement with reports in mammalian cells showing that
PARGKD is recruited to laser-induced microirradiation sites with faster kinetics compared to PARGWT and that this recruitment is only partially dependent on the PARP1 function44.
Strikingly, PARG-1CD::GFP was still capable of promoting chiasmata formation on the autosomes in _him-5_ mutants: in fact, the embryonic viability and numbers of DAPI-bodies in _parg-1(cd);
him-5_ were comparable to _him-5_ single mutants before and after IR exposure, and importantly, desynapsis was not observed. This suggests that the loading of PARG-1, rather than its
enzymatic activity for PAR removal, was sufficient to induce DSBs and promote efficient bivalent formation in the presence of exogenous DSBs. This was further corroborated by the fact that
in the _parp-1; parp-2; parg-1(gk120); him-5_ quadruple mutants, bivalent formation was not rescued, demonstrating that the roles exerted by PARG-1 in promoting DSB induction and meiotic
repair are independent of PARylation. In mammalian mitotic cells, it has been shown that PARG interacts with PCNA through a non-canonical PIP-box, and mutations in this domain, while (i)
abrogating interaction with PCNA, (ii) preventing PARG recruitment at damage sites, (iii) as well as its localization in the replication foci, they do not perturb catalytic activity;
conversely, mutations in the PARG catalytic domain do not affect interaction with PCNA43. This is consistent with our findings that PARG holds important roles in cellular homeostasis that
are independent of its enzymatic function, highlighting the multifaceted nature of this protein. Our data further demonstrate that the catalytic activity and the scaffolding properties of
PARG are required for distinct cellular processes (Fig. 7). Our study establishes a crucial role of PARG during meiotic prophase I in augmenting induction of meiotic DSBs and regulating
their repair via HR in a metazoan model. Further studies are necessary to clarify whether PARG-1 recruitment affects the structure of the SC resulting in the modulation of DSB formation and
recombination, or whether the presence of PARG-1 along the chromosomes influences the recruitment and dynamic behavior of other factors, which ultimately exert a regulatory role in DSB
formation and recombination. Our work highlights the multifaceted aspects of PARG in vivo not simply as an enzyme mediating the catabolism of PAR, but also as a pivotal factor intersecting
multiple functional branches acting during meiosis. METHODS GENETICS Worms were cultured at 20 °C according to standard conditions. The N2 strain was used as the WT control. We did not
notice any significant differences between _him-17(e2707)_ and _him-17(e2806)_ alleles and the former has been employed for the majority of the experiments unless otherwise indicated. The
_parp-1(ddr31)_ is a full knockout allele that we generated by CRISPR. In most of the experiments, the _parg-1(gk120)_ allele was employed unless otherwise indicated in brackets. All the
strains employed for this study are reported in the Supplementary Table 6. SCREENINGS AND RNA INTERFERENCE L4 worms were individually plated and moved onto fresh plates every 12 h for 3
days. Dead eggs were scored 24 h after the mother had been removed and male progeny after 3 days. Embryonic lethality and male progeny were calculated as the fraction of unhatched eggs/total
laid eggs and males/total hatched eggs respectively. RNA interference for _syp-1_ was performed by employing the clone from the Ahringer library. Bacteria were streaked on agarose plates
containing 12.5 mg/ml of tetracycline and 100 mg/ml of ampicillin. Single colonies were grown in 20 ml of LB with 100 mg/ml of ampicillin at 37 °C overnight and the following day, bacteria
were spun at maximum speed for 20 min and the pellet was resuspended in 2 ml of LB with 100 mg/ml of ampicillin. 100 μl of concentrated bacteria were spotted on NG Agar plates containing 100
mg/ml of ampicillin and 1 mM IPTG and transcription of RNA was induced at 37 °C overnight. The following day, WT L3 worms were placed on the induced plates and let laying eggs for 3 days,
after which, the mothers were removed. L3 F1 worms were picked onto freshly induced plates and dissected as young adults (24 h post-L4 stage). ANTIBODIES The following antibodies at the
indicated dilutions were employed for immunolocalization studies: rabbit polyclonal anti-HA (SIGMA, 1:1000), rabbit polyclonal anti-OLLAS (Genscript, 1:1500), rabbit polyclonal anti-PAR
(Trevigen, 1:1000), mouse monoclonal anti-GFP (Roche, 1:500), guinea pig polyclonal anti-HTP-3 (1:500)38, guinea pig polyclonal anti-HTP-3 (1:750) (Y. Kim lab), chicken polyclonal anti-SYP-1
(1:500)56, rabbit polyclonal anti-SYP-1 (this study, 1:1000), rabbit polyclonal anti-HTP-1 (1:500)50, rabbit polyclonal anti-RAD-51 (Novus, 1:10,000), guinea pig polyclonal
anti-phospho-SUN-1S8 (1:750)72, rabbit polyclonal anti-DSB-2 (1:5000)21, guinea pig polyclonal anti-XND-1 (1:2500)19, and mouse monoclonal anti-H3K4me2 (Millipore, 1:250). All the secondary
antibodies were Alexafluor-conjugated and used at 1:300. The following antibodies at the indicated dilutions were employed in western blot analysis: rabbit polyclonal anti-HA (SIGMA,
1:3000), mouse monoclonal anti-HA (Cell Signaling, 1:1000), mouse monoclonal anti-PARG-1 (this study, 1:500), chicken polyclonal anti-GFP (Abcam, 1:4000), rabbit polyclonal anti Histone-H3
(Abcam, 1:100,000), goat polyclonal anti-actin (Santa Cruz, 1:3000), mouse monoclonal anti-Tubulin (Thermofisher, 1:2000), and mouse monoclonal anti-GAPDH (Ambion, 1:5000). HRP-conjugated
secondary antibodies were purchased from Thermofisher and were used at 1:10,000 (goat anti-chicken), 1:15,000 (goat anti-rabbit) and 1:8000 (goat anti-mouse). CYTOLOGICAL PROCEDURES AND
IMAGE ACQUISITION For immunostaining experiments, synchronized worms of the indicated age were dissected and processed as previously described52 except for detection of PARG-1::GFP and
GFP::MSH-5. Briefly, worms were dissected in PBS and immediately placed in liquid nitrogen. Slides were placed in cold methanol at −20 °C for 1′ and then fixed with 2% PFA in 0.1 M K2HPO4
(pH 7.4) for 10′ in a humid chamber at room temperature. Samples were then processed as for regular staining. For GFP::MSH-5 detection, worms were dissected and fixed in 2.5% PFA for 2′ at
room temperature and then freeze-cracked in liquid nitrogen. Slides were placed in absolute ethanol at −20 °C for 10′ and then washed in 1× PBST. DAPI staining was performed as for normal
staining and GFP was directly acquired without employing a primary anti-GFP antibody. For quantification of PAR (Fig. 1d), samples were acquired with identical settings and equally adjusted
in Fiji. Gonads were divided into seven equal regions from mitotic tip to diplotene entry and a circle of fixed area was employed to assess absolute fluorescence in each nucleus with Fiji as
in ref. 52. For quantification of RAD-51 foci, gonads were divided into seven equal regions from the mitotic tip to the diplotene entry and number of RAD-51 foci was counted in each
nucleus. Number of nuclei analysed is reported in the Supplementary Table 5. Quantification of phospho-SUN-1S8 extension was performed as in87. Most images were captured using a Delta Vision
system equipped with an Olympus IX-71 microscope and a Roper CoolSNAP HQ2 camera with Z-stack set at 0.25 μm of thickness. Images in Fig. 6d, e were acquired with a Delta Vision system
equipped with an Evolve 512 EMCCD Camera; images in Figs. 6c, h and S8, were acquired with an upright fluorescence microscope Zeiss AxioImager.Z2 equipped with a Hamamatsu ORCA Flash 4.0,
sCMOS sensor camera, using UPlanSApo 100×/1.4 Oil objective. All images were deconvolved using Softworx (Applied Precision) except for images in Fig. 6c, h, which are non-deconvolved, and
Supplementary Fig. 8, where deconvolution was performed with ZEN 3.0 Blue software (Zeiss), using “constrained iterative” algorithm at maximum strength. Images were analysed in Photoshop,
were some false coloring was applied. BIOCHEMISTRY Fractionated protein extracts were produced as previously described56 and co-immunoprecipitation assays and Western Blot were performed as
previously shown52. At least 500 μg of nuclear extract (pooled nuclear-soluble and chromatin-bound fractions) were used for IPs and 30 μg of each fraction were used for Western blot of
fractionated extracts. Agarose GFP-traps (Chromotek) were employed for pull downs following manufacturer instructions. Buffer D (20 mM HEPES pH 7.9, 150 mM KCl, 20% glycerol, 0.2 mM EDTA,
0.2% Triton X-100 and complete protease inhibitor) was used for incubation with beads and washes. For western blot on whole-cell extracts, 200 synchronized young adults were hand-picked into
32 μl of 1 × TE buffer containing 1× Protease inhibitor cocktail (Roche), flash-frozen in liquid nitrogen, and Laemmli buffer to 1× final concentration was added after defrosting. Worms
were boiled for 10′ and then extracts were run on a precast 4–20% gradient acrylamide gel (Biorad). GENERATION OF PARG-1 AND SYP-1 ANTIBODIES To generate the mouse monoclonal
anti-PARG-1(2D4) antibody, the cDNA encoding for residues 1-350 of _C. elegans_ PARG-1 (isoform A) was generated by gene synthesis (IDT) and then cloned into pCoofy31 in frame with a C-ter 6
× His tail. The resulting plasmid was expressed in _E. coli_ BL21 cells according to standard procedures and 1 mg of purified protein was used to immunize three mice in the “in-house”
monoclonal antibody facility at Max Perutz Laboratories. Raw sera were screened by western blot employing extracts produced from WT, _parg-1(gk120)_ and _parg-1::GFP_ worms in order to
identify immunoreactive bands against PARG-1. Spleen cells from one mouse were fused with myeloma cells to generate hybridoma cell lines and mixed clones were successively diluted to gain
monoclonal line 2D4, from which the antibody was harvested. Antibody specificity was assessed by Western blot, where an immune reactive band of the expected MW of approximately 90 kDa in WT
but not in _parg-1_ mutant worms was detected (Fig. 2a). A synthetic peptide corresponding to amino acids 2-24 of SYP-1 protein (DNFTIWVDAPTEALIETPVDDQS) was used to generate anti-SYP-1
polyclonal antibodies in rabbits (Genscript). Raw sera were affinity purified and employed for immunostaining analysis. Anti-SYP-1 antibody was tested by immunofluorescence, where it
robustly detected SYP-1 in WT worms whereas the signal was largely gone upon _syp-1__RNAi_ (Supplementary Fig. 8). IRRADIATION Irradiation assays were performed as previously described52.
For quantification of synapsis and OLLAS::COSA-1 foci number in late pachytene nuclei, worms were dissected at the indicated time after irradiation and quantification was performed in the
last seven rows of nuclei before diplotene entry. For quantification of HA::RMH-1 and GFP::MSH-5 in Fig. 4, worms were dissected 8 h post-IR and gonads from transition zone to late pachytene
were divided into five equal regions and number of foci/nucleus was assessed. For diakinesis analysis, worms were dissected 24–27 h post irradiation. The dose employed for all irradiation
experiments was 10 Gy. Number of nuclei analysed for each condition are reported in Supplementary Table 1. CRISPR-CAS9 GENOME EDITING Generation of tagged or mutated lines was performed as
previously described52. Briefly, to tag endogenous _parg-1_ locus, GFP was amplified by PCR with primers carrying 25 base pairs of homology to the left and right side of the STOP codon of
_parg-1_ gene. To generate the PARG-1E554,555A catalytic-dead mutant, a synthetic ultramer (IDT) was employed, in which we included silent mutations to produce an Alu I restriction site for
screening purposes. The mutations were generated in both WT and _parg-1::GFP_ genetic backgrounds. To elicit a full knockout of _parp-1_, we employed two sgRNAs targeting the beginning and
the end of the gene. The _him-17::3xHA_ and _him-5::3xHA_ were generated by employing synthetic DNA ultramers (IDT) and N2 worms were injected. All the tagged lines carried a 5x-Gly linker
between the tag and the coding region. The _parg-1(ddr50)_ line carries the same deletion present in the VC130 strain, which we generated in both WT and CB4856 strains, by employing a
synthetic ultramer (IDT). All the lines generated by CRISPR were outcrossed to WT worms at least twice before use. RECOMBINATION ASSAY The recombination landscape was assessed following the
same strategy as in28, by exploiting different Dra I digestion pattern of SNPs present in the Bristol and Hawaiian genetic backgrounds. Briefly, _parg-1(gk120)_ and _parg-1(cd)_ mutations
were generated by CRISPR in both the N2 (Bristol) and CB4856 (Hawaii) strains. Bristol/Hawaiian F1 hermaphrodite hybrids carrying the indicated mutations were backcrossed to Bristol males
carrying a tdTomato fluorescent reporter expressed in the soma in order to monitor recombination frequency in the oocytes. The relevant regions containing the SNPs for chromosomes I
(snp_F56C11, snp_Y71G12, pkP1052, snp_DI007, snp_F58D5, CEI-247, uCEI-1361, snp_Y105E8B)88 and V (pkP5076, snp_Y61A9L, pkP5097, R10D12, snp_Y17D7B)88 in the indicated genetic intervals were
amplified by PCR and the products digested with Dra I to monitor recombination patterns. Data presented in Fig. 5 refer to the total number of worms analysed in independent replicates.
Statistical analysis of the differences in the recombination rate for each genetic interval between the mutant backgrounds and the controls is reported in the Supplementary Table S4.
REPORTING SUMMARY Further information on research design is available in the Nature Research Reporting Summary linked to this article. DATA AVAILABILITY All data generated or analysed during
this study are included in this published article (and its Supplementary Information files). The Source data underlying Figs. 1b, d, 3a, c, 4b–d, 5a, b, f, g, 6f, g, i and Supplementary
Figs. 2B, 3A–I, 4A, B, 5A, 6A, 7A are provided as Supplementary Information. All data are available from the authors upon reasonable request. Source data are provided with this paper.
REFERENCES * Koh, D. W. et al. Failure to degrade poly(ADP-ribose) causes increased sensitivity to cytotoxicity and early embryonic lethality. _Proc. Natl Acad. Sci. U.S.A._ 101, 17699–17704
(2004). Article ADS CAS PubMed PubMed Central Google Scholar * Menissier de Murcia, J. et al. Functional interaction between PARP-1 and PARP-2 in chromosome stability and embryonic
development in mouse. _EMBO J._ 22, 2255–2263 (2003). Article CAS PubMed PubMed Central Google Scholar * Slade, D. Mitotic functions of poly(ADP-ribose) polymerases. _Biochem.
Pharmacol._ https://doi.org/10.1016/j.bcp.2019.03.028 (2019). * O’Sullivan, J. et al. Emerging roles of eraser enzymes in the dynamic control of protein ADP-ribosylation. _Nat. Commun._ 10,
1182 (2019). Article ADS PubMed PubMed Central CAS Google Scholar * Dantzer, F. et al. Poly(ADP-ribose) polymerase-2 contributes to the fidelity of male meiosis I and spermiogenesis.
_Proc. Natl Acad. Sci. U.S.A._ 103, 14854–14859 (2006). Article ADS CAS PubMed PubMed Central Google Scholar * Ame, J. C. et al. Radiation-induced mitotic catastrophe in PARG-deficient
cells. _J. Cell Sci._ 122, 1990–2002 (2009). Article CAS PubMed Google Scholar * St-Laurent, J. F., Gagnon, S. N., Dequen, F., Hardy, I. & Desnoyers, S. Altered DNA damage response
in Caenorhabditis elegans with impaired poly(ADP-ribose) glycohydrolases genes expression. _DNA Repair (Amst.)_ 6, 329–343 (2007). Article CAS Google Scholar * Byrne, A. B. et al.
Inhibiting poly(ADP-ribosylation) improves axon regeneration. _Elife_ 5, https://doi.org/10.7554/eLife.12734 (2016). * Dequen, F., Gagnon, S. N. & Desnoyers, S. Ionizing radiations in
Caenorhabditis elegans induce poly(ADP-ribosyl)ation, a conserved DNA-damage response essential for survival. _DNA Repair (Amst.)_ 4, 814–825 (2005). Article CAS Google Scholar * Gagnon,
S. N., Hengartner, M. O. & Desnoyers, S. The genes pme-1 and pme-2 encode two poly(ADP-ribose) polymerases in Caenorhabditis elegans. _Biochem. J._ 368, 263–271 (2002). Article CAS
PubMed PubMed Central Google Scholar * Zickler, D. & Kleckner, N. Meiotic chromosomes: integrating structure and function. _Annu. Rev. Genet._ 33, 603–754 (1999). Article CAS PubMed
Google Scholar * Zickler, D. & Kleckner, N. Recombination, pairing, and synapsis of homologs during meiosis. _Cold Spring Harb. Perspect. Biol._ 7,
https://doi.org/10.1101/cshperspect.a016626 (2015). * Cao, L., Alani, E. & Kleckner, N. A pathway for generation and processing of double-strand breaks during meiotic recombination in S.
cerevisiae. _Cell_ 61, 1089–1101 (1990). Article CAS PubMed Google Scholar * Sun, H., Treco, D., Schultes, N. P. & Szostak, J. W. Double-strand breaks at an initiation site for
meiotic gene conversion. _Nature_ 338, 87–90 (1989). Article ADS CAS PubMed Google Scholar * Keeney, S., Giroux, C. N. & Kleckner, N. Meiosis-specific DNA double-strand breaks are
catalyzed by Spo11, a member of a widely conserved protein family. _Cell_ 88, 375–384 (1997). Article CAS PubMed Google Scholar * Chin, G. M. & Villeneuve, A. M. C. elegans mre-11 is
required for meiotic recombination and DNA repair but is dispensable for the meiotic G(2) DNA damage checkpoint. _Genes Dev._ 15, 522–534 (2001). Article CAS PubMed PubMed Central
Google Scholar * Meneely, P. M., McGovern, O. L., Heinis, F. I. & Yanowitz, J. L. Crossover distribution and frequency are regulated by him-5 in Caenorhabditis elegans. _Genetics_ 190,
1251–1266 (2012). Article CAS PubMed PubMed Central Google Scholar * Reddy, K. C. & Villeneuve, A. M. C. elegans HIM-17 links chromatin modification and competence for initiation of
meiotic recombination. _Cell_ 118, 439–452 (2004). Article CAS PubMed Google Scholar * Wagner, C. R., Kuervers, L., Baillie, D. L. & Yanowitz, J. L. xnd-1 regulates the global
recombination landscape in Caenorhabditis elegans. _Nature_ 467, 839–843 (2010). Article ADS CAS PubMed PubMed Central Google Scholar * Stamper, E. L. et al. Identification of DSB-1, a
protein required for initiation of meiotic recombination in Caenorhabditis elegans, illuminates a crossover assurance checkpoint. _PLoS Genet._ 9, e1003679 (2013). Article CAS PubMed
PubMed Central Google Scholar * Rosu, S. et al. The C. elegans DSB-2 protein reveals a regulatory network that controls competence for meiotic DSB formation and promotes crossover
assurance. _PLoS Genet._ 9, e1003674 (2013). Article CAS PubMed PubMed Central Google Scholar * Yin, Y. & Smolikove, S. Impaired resection of meiotic double-strand breaks channels
repair to nonhomologous end joining in Caenorhabditis elegans. _Mol. Cell. Biol._ 33, 2732–2747 (2013). Article CAS PubMed PubMed Central Google Scholar * Macaisne, N., Kessler, Z.
& Yanowitz, J. L. Meiotic double-strand break proteins influence repair pathway utilization. _Genetics_ 210, 843–856 (2018). Article CAS PubMed PubMed Central Google Scholar *
Serrentino, M. E. & Borde, V. The spatial regulation of meiotic recombination hotspots: are all DSB hotspots crossover hotspots? _Exp. Cell Res._ 318, 1347–1352 (2012). Article CAS
PubMed Google Scholar * Yokoo, R. et al. COSA-1 reveals robust homeostasis and separable licensing and reinforcement steps governing meiotic crossovers. _Cell_ 149, 75–87 (2012). Article
CAS PubMed PubMed Central Google Scholar * Rosu, S., Libuda, D. E. & Villeneuve, A. M. Robust crossover assurance and regulated interhomolog access maintain meiotic crossover number.
_Science_ 334, 1286–1289 (2011). Article ADS CAS PubMed PubMed Central Google Scholar * Youds, J. L. et al. RTEL-1 enforces meiotic crossover interference and homeostasis. _Science_
327, 1254–1258 (2010). Article ADS CAS PubMed PubMed Central Google Scholar * Hillers, K. J. & Villeneuve, A. M. Chromosome-wide control of meiotic crossing over in C. elegans.
_Curr. Biol._ 13, 1641–1647 (2003). Article CAS PubMed Google Scholar * Barnes, T. M., Kohara, Y., Coulson, A. & Hekimi, S. Meiotic recombination, noncoding DNA and genomic
organization in Caenorhabditis elegans. _Genetics_ 141, 159–179 (1995). CAS PubMed PubMed Central Google Scholar * de los Santos, T. et al. The Mus81/Mms4 endonuclease acts independently
of double-Holliday junction resolution to promote a distinct subset of crossovers during meiosis in budding yeast. _Genetics_ 164, 81–94 (2003). Google Scholar * Zalevsky, J., MacQueen, A.
J., Duffy, J. B., Kemphues, K. J. & Villeneuve, A. M. Crossing over during Caenorhabditis elegans meiosis requires a conserved MutS-based pathway that is partially dispensable in
budding yeast. _Genetics_ 153, 1271–1283 (1999). CAS PubMed PubMed Central Google Scholar * Kelly, K. O., Dernburg, A. F., Stanfield, G. M. & Villeneuve, A. M. Caenorhabditis elegans
msh-5 is required for both normal and radiation-induced meiotic crossing over but not for completion of meiosis. _Genetics_ 156, 617–630 (2000). CAS PubMed PubMed Central Google Scholar
* Tsai, C. J. et al. Meiotic crossover number and distribution are regulated by a dosage compensation protein that resembles a condensin subunit. _Genes Dev._ 22, 194–211 (2008). Article
CAS PubMed PubMed Central Google Scholar * Colaiacovo, M. P. et al. Synaptonemal complex assembly in C. elegans is dispensable for loading strand-exchange proteins but critical for
proper completion of recombination. _Dev. Cell_ 5, 463–474 (2003). Article CAS PubMed Google Scholar * Libuda, D. E., Uzawa, S., Meyer, B. J. & Villeneuve, A. M. Meiotic chromosome
structures constrain and respond to designation of crossover sites. _Nature_ 502, 703–706 (2013). Article ADS CAS PubMed PubMed Central Google Scholar * Pattabiraman, D., Roelens, B.,
Woglar, A. & Villeneuve, A. M. Meiotic recombination modulates the structure and dynamics of the synaptonemal complex during C. elegans meiosis. _PLoS Genet._ 13, e1006670 (2017).
Article PubMed PubMed Central CAS Google Scholar * Machovina, T. S. et al. A surveillance system ensures crossover formation in C. elegans. _Curr. Biol._ 26, 2873–2884 (2016). Article
CAS PubMed PubMed Central Google Scholar * Goodyer, W. et al. HTP-3 links DSB formation with homolog pairing and crossing over during C. elegans meiosis. _Dev. Cell_ 14, 263–274 (2008).
Article CAS PubMed Google Scholar * Martinez-Perez, E. & Villeneuve, A. M. HTP-1-dependent constraints coordinate homolog pairing and synapsis and promote chiasma formation during C.
elegans meiosis. _Genes Dev._ 19, 2727–2743 (2005). Article CAS PubMed PubMed Central Google Scholar * Zetka, M. C., Kawasaki, I., Strome, S. & Muller, F. Synapsis and chiasma
formation in Caenorhabditis elegans require HIM-3, a meiotic chromosome core component that functions in chromosome segregation. _Genes Dev._ 13, 2258–2270 (1999). Article CAS PubMed
PubMed Central Google Scholar * Bae, W., Park, J. H., Lee, M. H., Park, H. W. & Koo, H. S. Hypersensitivity to DNA double-strand breaks associated with PARG deficiency is suppressed by
exo-1 and polq-1 mutations in Caenorhabditis elegans. _FEBS J_. https://doi.org/10.1111/febs.15082 (2019). * Hodgkin, J., Horvitz, H. R. & Brenner, S. Nondisjunction mutants of the
nematode CAENORHABDITIS ELEGANS. _Genetics_ 91, 67–94 (1979). CAS PubMed PubMed Central Google Scholar * Kaufmann, T. et al. A novel non-canonical PIP-box mediates PARG interaction with
PCNA. _Nucleic Acids Res._ 45, 9741–9759 (2017). Article CAS PubMed PubMed Central Google Scholar * Mortusewicz, O., Fouquerel, E., Ame, J. C., Leonhardt, H. & Schreiber, V. PARG is
recruited to DNA damage sites through poly(ADP-ribose)- and PCNA-dependent mechanisms. _Nucleic Acids Res._ 39, 5045–5056 (2011). Article CAS PubMed PubMed Central Google Scholar *
Ohashi, S. et al. Subcellular localization of poly(ADP-ribose) glycohydrolase in mammalian cells. _Biochem. Biophys. Res. Commun._ 307, 915–921 (2003). Article CAS PubMed Google Scholar
* Winstall, E. et al. Preferential perinuclear localization of poly(ADP-ribose) glycohydrolase. _Exp. Cell Res._ 251, 372–378 (1999). Article CAS PubMed Google Scholar * Meyer-Ficca, M.
L., Meyer, R. G., Coyle, D. L., Jacobson, E. L. & Jacobson, M. K. Human poly(ADP-ribose) glycohydrolase is expressed in alternative splice variants yielding isoforms that localize to
different cell compartments. _Exp. Cell Res._ 297, 521–532 (2004). Article CAS PubMed Google Scholar * MacQueen, A. J., Colaiacovo, M. P., McDonald, K. & Villeneuve, A. M.
Synapsis-dependent and -independent mechanisms stabilize homolog pairing during meiotic prophase in C. elegans. _Genes Dev._ 16, 2428–2442 (2002). Article CAS PubMed PubMed Central
Google Scholar * de Carvalho, C. E. et al. LAB-1 antagonizes the Aurora B kinase in C. elegans. _Genes Dev._ 22, 2869–2885 (2008). Article PubMed PubMed Central CAS Google Scholar *
Martinez-Perez, E. et al. Crossovers trigger a remodeling of meiotic chromosome axis composition that is linked to two-step loss of sister chromatid cohesion. _Genes Dev._ 22, 2886–2901
(2008). Article CAS PubMed PubMed Central Google Scholar * Bhalla, N., Wynne, D. J., Jantsch, V. & Dernburg, A. F. ZHP-3 acts at crossovers to couple meiotic recombination with
synaptonemal complex disassembly and bivalent formation in C. elegans. _PLoS Genet._ 4, e1000235 (2008). Article PubMed PubMed Central CAS Google Scholar * Janisiw, E., Dello Stritto,
M. R., Jantsch, V. & Silva, N. BRCA1-BARD1 associate with the synaptonemal complex and pro-crossover factors and influence RAD-51 dynamics during Caenorhabditis elegans meiosis. _PLoS
Genet._ 14, e1007653 (2018). Article PubMed PubMed Central CAS Google Scholar * Li, Q. et al. The tumor suppressor BRCA1-BARD1 complex localizes to the synaptonemal complex and
regulates recombination under meiotic dysfunction in Caenorhabditis elegans. _PLoS Genet._ 14, e1007701 (2018). Article PubMed PubMed Central CAS Google Scholar * Jantsch, V. et al.
Targeted gene knockout reveals a role in meiotic recombination for ZHP-3, a Zip3-related protein in Caenorhabditis elegans. _Mol. Cell. Biol._ 24, 7998–8006 (2004). Article CAS PubMed
PubMed Central Google Scholar * Paix, A., Folkmann, A., Rasoloson, D. & Seydoux, G. High efficiency, homology-directed genome editing in caenorhabditis elegans using CRISPR-Cas9
ribonucleoprotein complexes. _Genetics_ 201, 47–54 (2015). Article CAS PubMed PubMed Central Google Scholar * Silva, N. et al. The fidelity of synaptonemal complex assembly is regulated
by a signaling mechanism that controls early meiotic progression. _Dev. Cell_ 31, 503–511 (2014). Article CAS PubMed Google Scholar * Crawley, O. et al. Cohesin-interacting protein
WAPL-1 regulates meiotic chromosome structure and cohesion by antagonizing specific cohesin complexes. _Elife_ 5, e10851 (2016). Article PubMed PubMed Central Google Scholar * Rog, O.
& Dernburg, A. F. Direct visualization reveals kinetics of meiotic chromosome synapsis. _Cell Rep._ https://doi.org/10.1016/j.celrep.2015.02.032 (2015). * Alpi, A., Pasierbek, P.,
Gartner, A. & Loidl, J. Genetic and cytological characterization of the recombination protein RAD-51 in Caenorhabditis elegans. _Chromosoma_ 112, 6–16 (2003). Article CAS PubMed
Google Scholar * Lemmens, B. B., Johnson, N. M. & Tijsterman, M. COM-1 promotes homologous recombination during Caenorhabditis elegans meiosis by antagonizing Ku-mediated non-homologous
end joining. _PLoS Genet._ 9, e1003276 (2013). Article CAS PubMed PubMed Central Google Scholar * Martin, J. S., Winkelmann, N., Petalcorin, M. I., McIlwraith, M. J. & Boulton, S.
J. RAD-51-dependent and -independent roles of a Caenorhabditis elegans BRCA2-related protein during DNA double-strand break repair. _Mol. Cell. Biol._ 25, 3127–3139 (2005). Article CAS
PubMed PubMed Central Google Scholar * Petalcorin, M. I., Galkin, V. E., Yu, X., Egelman, E. H. & Boulton, S. J. Stabilization of RAD-51-DNA filaments via an interaction domain in
Caenorhabditis elegans BRCA2. _Proc. Natl Acad. Sci. U.S.A._ 104, 8299–8304 (2007). Article ADS CAS PubMed PubMed Central Google Scholar * Penkner, A. et al. A conserved function for a
Caenorhabditis elegans Com1/Sae2/CtIP protein homolog in meiotic recombination. _EMBO J._ 26, 5071–5082 (2007). Article CAS PubMed PubMed Central Google Scholar * Gao, J., Kim, H. M.,
Elia, A. E., Elledge, S. J. & Colaiacovo, M. P. NatB domain-containing CRA-1 antagonizes hydrolase ACER-1 linking acetyl-CoA metabolism to the initiation of recombination during C.
elegans meiosis. _PLoS Genet._ 11, e1005029 (2015). Article PubMed PubMed Central CAS Google Scholar * Mets, D. G. & Meyer, B. J. Condensins regulate meiotic DNA break distribution,
thus crossover frequency, by controlling chromosome structure. _Cell_ 139, 73–86 (2009). Article CAS PubMed PubMed Central Google Scholar * Hayashi, M., Chin, G. M. & Villeneuve,
A. M. C. elegans germ cells switch between distinct modes of double-strand break repair during meiotic prophase progression. _PLoS Genet._ 3, e191 (2007). Article PubMed PubMed Central
CAS Google Scholar * Reichman, R., Shi, Z., Malone, R. & Smolikove, S. Mitotic and meiotic functions for the SUMOylation Pathway in the Caenorhabditis elegans germline. _Genetics_ 208,
1421–1441 (2018). Article CAS PubMed PubMed Central Google Scholar * Mateo, A. R. et al. The p53-like protein CEP-1 is required for meiotic fidelity in C. elegans. _Curr. Biol._ 26,
1148–1158 (2016). Article CAS PubMed PubMed Central Google Scholar * Woglar, A. & Villeneuve, A. M. Dynamic architecture of DNA repair complexes and the synaptonemal complex at
sites of meiotic recombination. _Cell_ 173, 1678–1691.e1616 (2018). Article CAS PubMed PubMed Central Google Scholar * Reuben, M. & Lin, R. Germline X chromosomes exhibit
contrasting patterns of histone H3 methylation in Caenorhabditis elegans. _Dev. Biol._ 245, 71–82 (2002). Article CAS PubMed Google Scholar * Penkner, A. M. et al. Meiotic chromosome
homology search involves modifications of the nuclear envelope protein Matefin/SUN-1. _Cell_ 139, 920–933 (2009). Article CAS PubMed Google Scholar * Woglar, A. et al. Matefin/SUN-1
phosphorylation is part of a surveillance mechanism to coordinate chromosome synapsis and recombination with meiotic progression and chromosome movement. _PLoS Genet._ 9, e1003335 (2013).
Article CAS PubMed PubMed Central Google Scholar * Hillers, K. J. & Villeneuve, A. M. Analysis of meiotic recombination in Caenorhabditis elegans. _Methods Mol. Biol._ 557, 77–97
(2009). Article CAS PubMed Google Scholar * Lim, J. G., Stine, R. R. & Yanowitz, J. L. Domain-specific regulation of recombination in Caenorhabditis elegans in response to
temperature, age and sex. _Genetics_ 180, 715–726 (2008). Article CAS PubMed PubMed Central Google Scholar * Patel, C. N., Koh, D. W., Jacobson, M. K. & Oliveira, M. A.
Identification of three critical acidic residues of poly(ADP-ribose) glycohydrolase involved in catalysis: determining the PARG catalytic domain. _Biochem. J._ 388, 493–500 (2005). Article
CAS PubMed PubMed Central Google Scholar * Gupte, R., Liu, Z. & Kraus, W. L. PARPs and ADP-ribosylation: recent advances linking molecular functions to biological outcomes. _Genes
Dev._ 31, 101–126 (2017). Article CAS PubMed PubMed Central Google Scholar * Weaver, A. N. & Yang, E. S. Beyond DNA repair: additional functions of PARP-1 in cancer. _Front. Oncol._
3, 290 (2013). Article PubMed PubMed Central Google Scholar * Ray Chaudhuri, A. & Nussenzweig, A. The multifaceted roles of PARP1 in DNA repair and chromatin remodelling. _Nat. Rev.
Mol. Cell Biol._ 18, 610–621 (2017). Article CAS PubMed PubMed Central Google Scholar * Gibson, B. A. & Kraus, W. L. New insights into the molecular and cellular functions of
poly(ADP-ribose) and PARPs. _Nat. Rev. Mol. Cell Biol._ 13, 411–424 (2012). Article CAS PubMed Google Scholar * Pasierbek, P. et al. A Caenorhabditis elegans cohesion protein with
functions in meiotic chromosome pairing and disjunction. _Genes Dev._ 15, 1349–1360 (2001). Article CAS PubMed PubMed Central Google Scholar * Smolikov, S. et al. SYP-3 restricts
synaptonemal complex assembly to bridge paired chromosome axes during meiosis in Caenorhabditis elegans. _Genetics_ 176, 2015–2025 (2007). Article CAS PubMed PubMed Central Google
Scholar * Kleckner, N. Chiasma formation: chromatin/axis interplay and the role(s) of the synaptonemal complex. _Chromosoma_ 115, 175–194 (2006). Article PubMed Google Scholar * Johzuka,
K. & Ogawa, H. Interaction of Mre11 and Rad50: two proteins required for DNA repair and meiosis-specific double-strand break formation in Saccharomyces cerevisiae. _Genetics_ 139,
1521–1532 (1995). CAS PubMed PubMed Central Google Scholar * Jagut, M. et al. Separable roles for a Caenorhabditis elegans RMI1 homolog in promoting and antagonizing meiotic crossovers
ensure faithful chromosome inheritance. _PLoS Biol._ 14, e1002412 (2016). Article PubMed PubMed Central CAS Google Scholar * Saito, T. T., Youds, J. L., Boulton, S. J. & Colaiacovo,
M. P. Caenorhabditis elegans HIM-18/SLX-4 interacts with SLX-1 and XPF-1 and maintains genomic integrity in the germline by processing recombination intermediates. _PLoS Genet._ 5, e1000735
(2009). Article PubMed PubMed Central CAS Google Scholar * Saito, T. T., Lui, D. Y., Kim, H. M., Meyer, K. & Colaiacovo, M. P. Interplay between structure-specific endonucleases
for crossover control during Caenorhabditis elegans meiosis. _PLoS Genet._ 9, e1003586 (2013). Article CAS PubMed PubMed Central Google Scholar * Link, J. et al. Transient and partial
nuclear lamina disruption promotes chromosome movement in early meiotic prophase. _Dev. Cell_ 45, 212–225.e217 (2018). Article CAS PubMed PubMed Central Google Scholar * Davis, M. W. et
al. Rapid single nucleotide polymorphism mapping in C. elegans. _BMC Genom._ 6, 118 (2005). Article CAS Google Scholar Download references ACKNOWLEDGEMENTS We are grateful to E.
Martinez-Perez, M. Zetka, A. Villeneuve, Y. Kim, and S. Smolikove for strains and reagents; A. Graf for performing the microinjections; D. Slade for helpful comments and discussion
throughout the development of this work; L. Krejčí, S. Uldrijan, and D. Šmajs for sharing equipment. Some strains were provided by the CGC, which is funded by NIH Office of Research
Infrastructure Programs (P40 OD010440). N.S. was funded by an Interdisciplinary Cancer Research (INDICAR) fellowship by the Mahlke-Obermann Stiftung and the European Union’s Seventh
Framework Program for Research, Technological Development under grant agreement no 609431; by the Grant Agency of Czech Republic (GA20-08819S) and a “Start-Up” grant from the Department of
Biology of Masaryk University. V.J. lab receives funding by the Austrian Science Fund (FWF; project no. P-31275-B28); A.v.H. lab by DK RNA (UW: W1207) and FWF URSPRUNG 2018 (I-1824-B22);
J.L.Y. lab by NIGMS (2 R01 GM104007); M.R. was funded in part by an MWRI postdoctoral fellowship. We acknowledge the core facility CELLIM supported by the Czech-BioImaging large RI project
(LM2018129 funded by MEYS CR) for their support with obtaining scientific data presented in this paper. AUTHOR INFORMATION Author notes * Eva Janisiw Present address: Centre for Anatomy and
Cell Biology, Medical University of Vienna, Vienna, Austria * Fabiola Balmir Present address: AHN Center for Reproductive Medicine, AHN McCandless, Pittsburgh, PA, USA AUTHORS AND
AFFILIATIONS * Department of Chromosome Biology, Max Perutz Laboratories, Vienna Biocenter, University of Vienna, Vienna, Austria Eva Janisiw, Antoine Baudrimont & Verena Jantsch *
Department of Obstetrics, Gynecology, and Reproductive Sciences, Magee-Womens Research Institute, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA Marilina Raices, Fabiola
Balmir & Judith L. Yanowitz * Center for Integrative Bioinformatics Vienna (CIBIV), Max Perutz Laboratories, Medical University of Vienna, Vienna BioCenter, University of Vienna, Vienna,
Austria Luis F. Paulin & Arndt von Haeseler * Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, Vienna, Austria Arndt von Haeseler *
Department of Biology, Faculty of Medicine, Masaryk University, Brno, Czech Republic Nicola Silva Authors * Eva Janisiw View author publications You can also search for this author inPubMed
Google Scholar * Marilina Raices View author publications You can also search for this author inPubMed Google Scholar * Fabiola Balmir View author publications You can also search for this
author inPubMed Google Scholar * Luis F. Paulin View author publications You can also search for this author inPubMed Google Scholar * Antoine Baudrimont View author publications You can
also search for this author inPubMed Google Scholar * Arndt von Haeseler View author publications You can also search for this author inPubMed Google Scholar * Judith L. Yanowitz View author
publications You can also search for this author inPubMed Google Scholar * Verena Jantsch View author publications You can also search for this author inPubMed Google Scholar * Nicola Silva
View author publications You can also search for this author inPubMed Google Scholar CONTRIBUTIONS N.S. designed the research and performed most of the experiments with the technical
support of E.J.; M.R., F.B., and J.L.Y. generated some strains, analysed diakinesis chromosomes, performed the recombination assay on chromosome I, and carried out statistical analysis of
the data; L.F.P. and A.v.H. analysed whole genome sequencing data, which initiated the analysis of the catalytic-dead _parg-1_ mutants; A.B. produced the _HA::rmh-1_ tagged line and made
Fig. 7; V.J. provided logistic, infrastructure, resources, and conceptual support; J.L.Y., V.J., and N.S. wrote the paper. CORRESPONDING AUTHOR Correspondence to Nicola Silva. ETHICS
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Poly(ADP-ribose) glycohydrolase coordinates meiotic DNA double-strand break induction and repair independent of its catalytic activity. _Nat Commun_ 11, 4869 (2020).
https://doi.org/10.1038/s41467-020-18693-1 Download citation * Received: 02 April 2020 * Accepted: 07 September 2020 * Published: 25 September 2020 * DOI:
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