Multifactorial epigenomic profiling of six chromatin states in single cells

Multifactorial epigenomic profiling of six chromatin states in single cells

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We developed MAbID, a method for combined genomic profiling of histone modifications and chromatin-binding proteins in single cells, enabling researchers to study the interconnectivity


between gene-regulatory mechanisms. We demonstrated MAbID’s implementation in profiling multifactorial changes in chromatin signatures during in vitro neural differentiation and in primary


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REFERENCES * Vandereyken, K. et al. Methods and applications for single-cell and spatial multi-omics. _Nat. Rev. Genet._ 24, 494–515 (2023). A REVIEW ARTICLE PROVIDING AN OVERVIEW OF


MULTI-OMIC AND SINGLE-CELL SEQUENCING TECHNOLOGIES. Article  CAS  PubMed  Google Scholar  * Gopalan, S. et al. Simultaneous profiling of multiple chromatin proteins in the same cells. _Mol.


Cell_ 81, 4736–4746 (2021). ONE OF THE FIRST APPROACHES TO MEASURE SEVERAL HISTONE MODIFICATIONS IN THE SAME CELL BY IMPLEMENTING TN5-TAGMENTATION. Article  CAS  PubMed  PubMed Central 


Google Scholar  * Meers, M. P. et al. Multifactorial profiling of epigenetic landscapes at single-cell resolution using MulTI-Tag. _Nat. Biotechnol._ 41, 708–716 (2023). A MULTIFACTORIAL


METHOD USING ANTIBODY–ADAPTER CONJUGATES IN COMBINATION WITH TN5. Article  CAS  PubMed  Google Scholar  * Bartosovic, M. & Castelo-Branco, G. Multimodal chromatin profiling using


nanobody-based single-cell CUT&Tag. _Nat. Biotechnol._ 41, 794–805 (2023). A METHOD COMBINING MULTIFACTORIAL PROFILING WITH ATAC-SEQ USING NANOBODY–TN5 FUSIONS. Article  CAS  PubMed 


Google Scholar  * Handa, T. et al. Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input. _Nat. Protoc._ 15, 3334–3360 (2020). THIS PROTOCOL


DESCRIBES THE GENERATION OF UNIQUELY BARCODED ANTIBODY–DNA CONJUGATES. Article  CAS  PubMed  Google Scholar  Download references ADDITIONAL INFORMATION PUBLISHER’S NOTE Springer Nature


remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. THIS IS A SUMMARY OF: Lochs, S. J. A. et al. Combinatorial single-cell profiling of


major chromatin types with MAbID. _Nat. Methods_ https://doi.org/10.1038/s41592-023-02090-9 (2023). RIGHTS AND PERMISSIONS Reprints and permissions ABOUT THIS ARTICLE CITE THIS ARTICLE


Multifactorial epigenomic profiling of six chromatin states in single cells. _Nat Methods_ 21, 20–21 (2024). https://doi.org/10.1038/s41592-023-02091-8 Download citation * Published: 04


December 2023 * Issue Date: January 2024 * DOI: https://doi.org/10.1038/s41592-023-02091-8 SHARE THIS ARTICLE Anyone you share the following link with will be able to read this content: Get


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